Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30775
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 81 1e-15
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 47 2e-05
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 44 1e-04
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 41 0.001
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 41 0.001
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 40 0.002
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 39 0.004
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 39 0.005
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 38 0.009
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 37 0.022
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 36 0.029
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021) 36 0.029
SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0) 36 0.050
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 34 0.15
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 32 0.62
SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0) 32 0.62
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 32 0.62
SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 32 0.62
SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05) 31 0.81
SB_37264| Best HMM Match : Complex1_LYR (HMM E-Value=4.2) 31 1.1
SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 31 1.1
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 2.5
SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_53163| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_31240| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26) 28 7.6
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.6
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +1
Query: 172 LH*GDKFGRKRQPRPCNIFKKSGRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAF 351
L+ G++ +++Q I+K LK +++E I D KAL+I+P DPKALFRRSQAF
Sbjct: 38 LYSGNEKDKEKQKEKAVIYKNRAACQLKLEKYEAAIKDATKALDIVPNDPKALFRRSQAF 97
Query: 352 ECLERFEEAYRDAKTIFTVDPTNKAVQ 432
E R EEA++DA+T+ ++P ++ V+
Sbjct: 98 EATGRLEEAFKDARTLSHLEPKSERVR 124
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRD------LATYLKNRAAAYLR 256
+ A K +GN FK+ +Y+ A++ Y A+ L +D A KNRAA L+
Sbjct: 7 KSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLK 65
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +2
Query: 80 YTMVVQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLR 256
Y + +++EAE K K N FK NY AITFYT+AI L D+ Y NR+ YL+
Sbjct: 179 YVLSLEKEAEDLKLKANGYFKEGNYNSAITFYTQAIEL----KADVPAYYGNRSFCYLK 233
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/79 (24%), Positives = 43/79 (54%)
Frame = +1
Query: 250 LKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAV 429
LKT+ + ++D +KA+++ + K +RR+ A L +F+ + +D + + P++K
Sbjct: 232 LKTEYYGLALADANKAIQLDRKYIKGYYRRATANMALGKFKLSLKDYEMVVKFHPSDKDA 291
Query: 430 QPILSRLHTVVQERARQNA 486
+ + +VQ +A + A
Sbjct: 292 KAKYTECKKIVQRQAFEKA 310
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 86 MVVQEEAESYKNKGNDAFKSENYQEAITFYTKAINLA-EKGSRDLATYLKNRAAAY 250
M E+A+ K KGN FK Y++AI YT+AI L + +DL+T+ +NRAAAY
Sbjct: 135 MTPSEQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAY 190
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 262 EFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTI 399
+FE V+ + KALE+ + KAL RR++A E LER +E +D +
Sbjct: 195 QFENVVEEATKALELNSKYTKALMRRARALEKLERKQECLQDLTAV 240
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 47.2 bits (107), Expect = 2e-05
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = +1
Query: 214 PCNIFKKSGRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEA----- 378
PC + S LK E+ I DC++AL++ KALFRR QA E ++ +EEA
Sbjct: 368 PC--YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAMLQTV 425
Query: 379 ----YRDAK-TIFTVDPTNKAVQPI--LSRLHTVVQER 471
+ DAK T++ DP + V L+ L T + ER
Sbjct: 426 SDSNHSDAKSTLYICDPAGENVPNAFHLNLLKTTLSER 463
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 92 VQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLRPKNSK 271
+Q++A ++ KGNDA K E +QEA+ +YTK I L + R NRA +L+ K
Sbjct: 860 LQKKANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHR----LFSNRALCHLKLNKPK 915
Query: 272 K 274
+
Sbjct: 916 E 916
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/83 (27%), Positives = 48/83 (57%)
Frame = +1
Query: 271 KVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSRL 450
K I C+KAL+I E+ KALFRR +A L+ +E++ D + +DP N+ + L +
Sbjct: 1036 KCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLELDPKNREAREQLKIV 1095
Query: 451 HTVVQERARQNAQTSNKVEQCLS 519
+ ++++ ++ + + + + L+
Sbjct: 1096 NGMLKDHHQKEKKLYSNIFERLA 1118
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 214 PCNIFKKSGRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEA 378
PC + S LK E+ I DC++AL++ KALFRR QA E ++ +EEA
Sbjct: 41 PC--YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 93
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 238 GRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVD 411
G L K +E++K + ALE+ P DP L RS+ + L + + AYRDA+ D
Sbjct: 23 GDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEED 80
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 104 AESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLRPKNS 268
A K+KGNDAF+S +Y+E++ +YT++I L + A NRA A K S
Sbjct: 215 ANREKDKGNDAFRSGDYKESLVYYTRSIEL-----KPTAASYNNRAMAVRNVKTS 264
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/73 (24%), Positives = 41/73 (56%)
Frame = +1
Query: 283 DCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSRLHTVV 462
D + AL + P++ KAL+RR+ A + L +++ A +D ++ +D N + + L + +
Sbjct: 772 DANTALGLQPDNVKALYRRALARKALGKYDTAAKDLLSLVKIDSKNMSGKKELDTVLELC 831
Query: 463 QERARQNAQTSNK 501
++ R+ ++ K
Sbjct: 832 RKERRETQKSQPK 844
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 277 ISDCDKALEIIPEDPKALFRRSQAFECLER 366
+ DC +L +IP+ KA +R++ FE LE+
Sbjct: 477 VKDCTSSLNLIPDSLKAHLKRAEQFEHLEK 506
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +2
Query: 104 AESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLRPKNSKK 274
AE+ K +GN + +NY AI Y+KAI A +AT+ NR+AAY+ N K
Sbjct: 34 AEAKKAEGNREYGLKNYVSAIALYSKAIEFAP----HVATFYGNRSAAYMMISNYDK 86
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 202 RQPRPCNIFKKSGRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAY 381
+ P +F K ++ K+ I DCDKA +I P+ + R +A E L +E+A
Sbjct: 77 KNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKWRGRAHEFLGHWEKAD 136
Query: 382 RDAKTIFTVD 411
+D +D
Sbjct: 137 KDLAQALKLD 146
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 95 QEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGS 208
+++AE KN+GN K E +QEAI Y++AI L S
Sbjct: 88 RQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNS 125
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 262 EFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEA 378
+FEK + D D A+ + P+ PK FRR +A L+ F +A
Sbjct: 318 QFEKALQDADVAISLAPDWPKGFFRRGRALAGLKLFSDA 356
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 EFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPT-NKAVQPI 438
E+ +VI LE ++ KALFRR++A + EEA D K +DP+ K V+
Sbjct: 288 EYYEVIKHTSTVLEKDKDNVKALFRRAKAHKACWDPEEARSDFKRAAELDPSLTKVVRKE 347
Query: 439 LSRLHTVVQERARQNAQTSNKV 504
+S L ++++ ++ + K+
Sbjct: 348 VSELDQMIKDHNAEDREKMKKL 369
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +1
Query: 199 KRQPRPCNIFKKSGRSLLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEA 378
K P ++ + ++T + E+ + D KA E+ P PKA +R+ A +C+ R EA
Sbjct: 50 KLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAELNPLWPKAHYRQGVALQCMGRHAEA 109
Query: 379 YRDAKTIFTVD 411
T D
Sbjct: 110 LAAFATALAQD 120
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 107 ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRA 241
++ K +GNDAF +YQ+A YT+A+ + K A NRA
Sbjct: 34 QAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRA 78
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/72 (22%), Positives = 40/72 (55%)
Frame = +1
Query: 268 EKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSR 447
++ I DC +A+ + KA +R+ + E++EEA RD +++ D +++ + +L +
Sbjct: 88 DQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEK 147
Query: 448 LHTVVQERARQN 483
+++ R++
Sbjct: 148 AKLELKKSKRKD 159
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 107 ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRA 241
++ K +GNDAF +YQ+A YT+A+ + K A NRA
Sbjct: 34 QAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRA 78
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/72 (22%), Positives = 40/72 (55%)
Frame = +1
Query: 268 EKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSR 447
++ I DC +A+ + KA +R+ + E++EEA RD +++ D +++ + +L +
Sbjct: 88 DQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEK 147
Query: 448 LHTVVQERARQN 483
+++ R++
Sbjct: 148 AKLELKKSKRKD 159
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 116 KNKGNDAFKSENYQEAITFYTKAIN 190
K KGN AFK + Y+EA+ YT+A+N
Sbjct: 124 KEKGNLAFKQQKYEEAVKLYTQALN 148
>SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021)
Length = 304
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRA 241
E A SYK +GN +K +N+++AI YT+ I L + A NRA
Sbjct: 82 ENALSYKEEGNYEYKRKNFKKAIDAYTEGIKLRCQDGHVNAILYTNRA 129
>SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0)
Length = 900
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAINL 193
E E + +GN FK + +++A FYTKAINL
Sbjct: 533 EICEGLRLRGNQYFKDKQFKQASVFYTKAINL 564
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 95 QEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRD 214
+++AE +G + +NY+EAI Y +A+ L +K S D
Sbjct: 188 RDQAEELMGRGRKYYDMDNYEEAIEHYKEALRLYQKTSDD 227
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 95 QEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRD 214
+++AE +G + +NY+EAI +A+ L +K S D
Sbjct: 26 RDQAEELMGRGRKYYDMDNYEEAIGHSKEALRLYQKTSDD 65
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 116 KNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLR 256
K GN+AF + + A+ Y +A+NLA A NRAAA+++
Sbjct: 338 KTIGNEAFCKQQFLTAVNMYNEALNLAPNS----AVLYANRAAAFIK 380
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAI 187
++A S K +GN FK +NY+EA+ Y +A+
Sbjct: 30 DQAFSLKEEGNGCFKQKNYREAMKKYHRAM 59
>SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 593
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 95 QEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRD 214
QE+ +++ N GN K NY+EAI T A+ L EK D
Sbjct: 448 QEQGDAHFNIGNLHCKLGNYEEAIVNLTDALRLFEKIHND 487
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATY 226
EEA + K+ GN FK Y EAI YT A+ + R + +
Sbjct: 431 EEALNLKDAGNKKFKQGCYVEAIKIYTSALEVCPPMKRPVTRH 473
>SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 158
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 98 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATY 226
EEA + K+ GN FK Y EAI YT A+ + R + +
Sbjct: 72 EEALNLKDAGNKKFKQGCYVEAIKIYTSALEVCPPMKRPVTRH 114
>SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 211 RPCNIFKKSGRSLLKTKEFEKVI-SDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRD 387
R ++++ S LL+ E+ K ++ K L+ + KAL+RR+QA+ L+ +++ D
Sbjct: 116 RAKDVWRLSASELLQLAEYHKAKGTEFFKVLQSEDTNIKALYRRAQAYLELDEIDKSRED 175
Query: 388 AKTIFTVDPT-NKAVQPILSRLHT 456
+ VD +K ++ R T
Sbjct: 176 IEKALQVDSAMHKTHSDVVLRFKT 199
>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 101 EAESYKNKGNDAFKSENYQEAITFYTKAINLA 196
E +SY N GN AF +Y +A +Y K + +A
Sbjct: 301 EGKSYGNLGNAAFARSDYTKAREYYNKCLEIA 332
>SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05)
Length = 187
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 292 KALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSRL 450
+ L+I P++ KALFR+ + EA K +DP NK ++ L L
Sbjct: 2 QVLQIDPDNVKALFRKGKVLASKGELSEALPLIKKANQLDPNNKTIRAELRSL 54
>SB_37264| Best HMM Match : Complex1_LYR (HMM E-Value=4.2)
Length = 180
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 564 MANLLVLAKENSGAEVMLKNGVVQRIQQLLKVEKNSEIYINAIRVIGQICKKNIERTRAV 743
M+ LVL K+ GA +++++ ++L +E++SE AIR + K+ E RA+
Sbjct: 1 MSGKLVLKKKVRGAHRGAATKLIRKVNEILDLEEHSEDEKLAIRQLRDSAKEKAETLRAL 60
>SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 1053
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 564 MANLLVLAKENSGAEVMLKNGVVQRIQQLLKVEKNSEIYINAIRVIGQICKKNIERT 734
M+ LVL K+ GA +++++ ++L +EK+SE AIR + K+ E T
Sbjct: 1 MSGKLVLKKKVRGAHRGAARKLIRKVNEILDLEKHSEDEKLAIRQLRDSAKEKAETT 57
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 101 EAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLR 256
+A K++GN A + + Q+AI FYT+AI L + NR+AA+ +
Sbjct: 8 KAAKLKDQGNAALSAGDTQKAIEFYTEAILLDPANH----VFYSNRSAAFAK 55
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 107 ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDL 217
+++ GN K NY++AI +Y KA LAEK + D+
Sbjct: 306 KAFARIGNSYAKQNNYKDAIKYYNKA--LAEKRTPDV 340
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 116 KNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAY 250
K KGN+ FK ++ A YT+AI ++ D Y NRAA +
Sbjct: 369 KEKGNEYFKKGDFPSAQKHYTEAI---KRNPEDAKLY-SNRAATF 409
>SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 582 LAKENSGAEVMLKNGVVQRIQQLLKVEKNSE--IYINAIRVIGQICKKNIERTR 737
L KE + E MLK ++Q QQL EK S+ Y+ ++ Q K E+ R
Sbjct: 111 LEKEKAKGEEMLKTDILQLKQQLSSQEKESQNSDYLRQLQEENQSLKDECEKLR 164
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 582 LAKENSGAEVMLKNGVVQRIQQLLKVEKNSEIYINAIRVIGQICKKNIERTRAVLKVVGI 761
L +EN GAE L+ ++ + ++E N E ++N + V N+E T +V+ V GI
Sbjct: 935 LIRENEGAEAQLERASSEQKDYITRLEVNVEEHVNQVHV-----ASNVEST-SVMVVDGI 988
>SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 95 QEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRD 214
Q + +++ N GN K NY+EAI T A+ L EK D
Sbjct: 747 QAQGDAHFNIGNLNCKLGNYEEAIVNLTDALRLFEKIHND 786
>SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1248
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Frame = +1
Query: 316 DPKALFRR--SQAFECLERFEEAYRDAKTIFTV-----DPTNKAVQPILSRLHTVVQERA 474
DPK R + E + R E+ + K IFT DP ++ L HT E
Sbjct: 187 DPKTFIARIKPKVLELIGRQEKPIK-VKFIFTCGFIKEDPATAQIEEELGYFHTEKPEIV 245
Query: 475 RQNAQTSNKVEQCLSWLLG*VKILKNVRRPW 567
++A S+ + ++LLG V++ + W
Sbjct: 246 TESADLSDLFDTMTNYLLGLVELFQKQGSGW 276
>SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1577
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 564 MANLLVLAKENSGAEVMLKNGVVQRIQQLLKVEKNSEIYINAIRVIGQICKKNIERTRAV 743
M+ LVL K+ GA +++++ ++L +E++SE AIR K+ E RA+
Sbjct: 1 MSGQLVLKKKVRGAHRGAATKLIRKVNEILDLEEHSEDEKLAIRQHRDSAKEKAETVRAL 60
>SB_53163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 546 EKREKAMANLLVLAKENSGAEVMLKNGVVQRIQQLLKVEKNSE--IYINAIRVIGQICKK 719
E+ + L L KE + E MLK ++Q QQL EK S+ Y+ ++ Q K
Sbjct: 50 EQIRELQVKLRQLEKEKAKGEEMLKTDILQLKQQLPSQEKESQNSDYLRQLQEENQSLKD 109
Query: 720 NIER 731
E+
Sbjct: 110 ECEK 113
>SB_31240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +1
Query: 316 DPKALFRR--SQAFECLERFEEAYRDAKTIFTV-----DPTNKAVQPILSRLHTVVQERA 474
DPK R + E + R E+ + K IFT DP ++ L HT E
Sbjct: 187 DPKTFIARIKPKVLELISRQEKPIK-VKFIFTCGFIKEDPATAQIEEELGYFHTEKPEIV 245
Query: 475 RQNAQTSNKVEQCLSWLLG*VKILKNVRRPW 567
++ S+ + ++LLG V++ + W
Sbjct: 246 TESTDLSDLFDTMTNYLLGLVELFQKQGSGW 276
>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1652
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 628 TPFFNITSAPLFSFAKTNRLAMAFSRFSISSPNPKANL 515
+P NIT+ L S A ++A FSR S P+PK N+
Sbjct: 956 SPRQNITATSLKSSAP--KIAATFSRLSTVKPSPKPNI 991
>SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26)
Length = 598
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 292 KALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDP 414
+ALEI P+D L RS + L F EA +DA + P
Sbjct: 7 EALEIEPDDEDVLGCRSAVYTKLGMFNEARKDADRLIANVP 47
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 453 HCSTRASSPKCSNKQ*SGTMFKLAFG--LGEDIEKREKAMANLLVLAKENSGAEVMLK 620
HC+ SSP C K+ + KLA G L + I++ +K A + +++ +G V ++
Sbjct: 190 HCTQVTSSPGCYIKEETNLWEKLASGSPLNDCIQQIKKEQAGDISKSQDGTGCRVKVE 247
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,770,570
Number of Sequences: 59808
Number of extensions: 420056
Number of successful extensions: 1747
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1745
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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