Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30774
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.57 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.3  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 271 RRSRWNGGDNNNVSDGLKAEAEE 203
           +R +W GG+  +  +G K E +E
Sbjct: 10  KRMKWEGGEEGSPEEGDKLEGDE 32


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -1

Query: 534 DRSRECRSSIAKPSESNP--PTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNN 361
           DR+     +++  S   P  P + KP+    G       NSPV   + G    +  + N 
Sbjct: 5   DRALSLDQNLSMGSLGAPQSPLDMKPDASTLGQFSPQGPNSPVSFSMGGHGSLLSPSGNT 64

Query: 360 PVKPRDS 340
           P K   S
Sbjct: 65  PNKSSTS 71


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 366 NNPVKPRDSEVVEETKSEQEK 304
           +NP+ P +SE +   KSE+E+
Sbjct: 103 HNPLTPPNSEPLVSPKSEKEE 123


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 56  KYADSTSSTGVASPQDLSTNGAPP 79


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 557 KPAEATSTTGVASAAPALRNHLSP 486
           K A++TS+TGVAS      N   P
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPP 123


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 304  LLLLRFSLFNHFRISW 351
            LLL+ +S+FN   +SW
Sbjct: 1017 LLLVIYSVFNMNNVSW 1032


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 304  LLLLRFSLFNHFRISW 351
            LLL+ +S+FN   +SW
Sbjct: 1017 LLLVIYSVFNMNNVSW 1032


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 607 LNGKFCTPEKW 639
           LN  FC P KW
Sbjct: 97  LNSCFCDPAKW 107


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 607 LNGKFCTPEKW 639
           LN  FC P KW
Sbjct: 97  LNSCFCDPAKW 107


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 580 GLVLSLLRNPLKRPVRP 530
           G++ SLL  PL  P RP
Sbjct: 133 GVLRSLLDRPLPAPERP 149


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 319  FSLFNHFRISWLHWII 366
            FS+F  F ++ LH+++
Sbjct: 1414 FSMFERFHVNKLHFLL 1429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,649
Number of Sequences: 336
Number of extensions: 2239
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)