Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30774
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.3
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.0
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 7.0
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 7.0
Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 7.0
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 27 9.2
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 9.2
AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical ... 27 9.2
AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical ... 27 9.2
AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 528 SRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSP 415
SR RS+ K S S+P T EQPAA P +Q+ + +P
Sbjct: 34 SRSTRST--KSSRSSPKTVPVTEQPAAAPPQQLEQPTP 69
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 540 QYDRSREC-RSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAG 394
++ S+EC R P E PP E P+ P P + + SP G G
Sbjct: 199 EHQESQECPRGEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKG 248
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -1
Query: 513 SSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEV 334
+S A+P PP PE P A P PV K+++ + P K + SE
Sbjct: 47 ASSAEPPPPPPPAPKVPEPPKAPP--------PVDDVKKIEEKEVEKKPDEPAKSKKSEK 98
Query: 333 VEETKSEQEK 304
E++K+E K
Sbjct: 99 KEKSKNEGSK 108
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVN 364
D D E S SN + ++P P + E PV + ++KK++ V
Sbjct: 677 DVDDNDDESESEPEPEKNSNKKNSKRVKEPEPEPEE---EPEPVKKS-KRSLKKVKVAVP 732
Query: 363 NPVKPRDSEVVEETKSEQE 307
+P E EE+ SEQE
Sbjct: 733 DPAPESKDEENEESVSEQE 751
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVN 364
D D E S SN + ++P P + E PV + ++KK++ V
Sbjct: 675 DVDDNDDESESEPEPEKNSNKKNSKRVKEPEPEPEE---EPEPVKKS-KRSLKKVKVAVP 730
Query: 363 NPVKPRDSEVVEETKSEQE 307
+P E EE+ SEQE
Sbjct: 731 DPAPESKDEENEESVSEQE 749
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVN 364
D D E S SN + ++P P + E PV + ++KK++ V
Sbjct: 677 DVDDNDDESESEPEPEKNSNKKNSKRVKEPEPEPEE---EPEPVKKS-KRSLKKVKVAVP 732
Query: 363 NPVKPRDSEVVEETKSEQE 307
+P E EE+ SEQE
Sbjct: 733 DPAPESKDEENEESVSEQE 751
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVN 364
D D E S SN + ++P P + E PV + ++KK++ V
Sbjct: 675 DVDDNDDESESEPEPEKNSNKKNSKRVKEPEPEPEE---EPEPVKKS-KRSLKKVKVAVP 730
Query: 363 NPVKPRDSEVVEETKSEQE 307
+P E EE+ SEQE
Sbjct: 731 DPAPESKDEENEESVSEQE 749
>Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical
protein T06D8.3 protein.
Length = 396
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 331 NHFRISWLHWIIDCCLDFFNCSC 399
NH+R W+ W+I + +F C C
Sbjct: 273 NHWRDIWVAWVIGIFMAWFLCYC 295
>Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 412 NWAVLENLF*WPGCGLFWFCFSGRIGL 492
N + E F WP LFW CF ++GL
Sbjct: 305 NSLIQECKFFWPITHLFWACFIMKLGL 331
>Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 412 NWAVLENLF*WPGCGLFWFCFSGRIGL 492
N + E F WP LFW CF ++GL
Sbjct: 305 NSLIQECKFFWPITHLFWACFIMKLGL 331
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/78 (20%), Positives = 26/78 (33%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVN 364
D Y+ S + S P PPT+T P + + + +I TT
Sbjct: 265 DDYESSEDISESHTTPPTQTPPTQTPPTTTTTRRVTVVVTSPTTTTPRRTITTRIWTTTT 324
Query: 363 NPVKPRDSEVVEETKSEQ 310
P ++ E + Q
Sbjct: 325 TQAPPTEAPPTEAPPTTQ 342
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 450 AGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEK 304
AGPL F+ +PV+ V +T + +P D E E+ EQE+
Sbjct: 1405 AGPLWSDFDYTPVIGEDGEEVMDGETQTQDGSEPGDPEFDEQRGQEQEE 1453
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Frame = -1
Query: 543 DQYDRSRECRSSIAKPSESNPPTE--------TKPEQPAAGPLKQIFENSPVLQGIAGAV 388
D + R E R++ +P ES E K P A LK FEN+P + + A
Sbjct: 442 DSFPRIEE-RTTTPEPMESEEDAEHTSSEDNHEKELDPFAAVLK-FFENNPPREALEAAG 499
Query: 387 KKIQTTVNNPVKP 349
+ T P+KP
Sbjct: 500 SETAATTQKPLKP 512
>AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical
protein T06D4.1b protein.
Length = 320
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 575 GAQSTEKPAEATSTTGVASAAPAL 504
GA+++E PAEA++ A APAL
Sbjct: 240 GAETSEAPAEASARASEAPEAPAL 263
>AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical
protein T06D4.1a protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 575 GAQSTEKPAEATSTTGVASAAPAL 504
GA+++E PAEA++ A APAL
Sbjct: 361 GAETSEAPAEASARASEAPEAPAL 384
>AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical
protein T21G5.1 protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 528 SRECRSSIAKPSESNPPTETKPEQPAAG-PLKQIFENSPVLQGIAGAVKKIQTTVN 364
SRE A P + PP E KP++P P+ QI Q G + ++ ++
Sbjct: 37 SREGSKESANPPGTPPPPEEKPKEPMVDVPVVQITPEIKGCQFYHGIIPRVDAELS 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,159,884
Number of Sequences: 27780
Number of extensions: 231423
Number of successful extensions: 811
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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