Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30773
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 52  PCGYEIRSDAVVSLGHFHIPIDLLTITSRRSENRSFSA 165
           PC Y      V+SLG F + + L T      E+ S ++
Sbjct: 33  PCVYLTSFSVVLSLGSFIVSVYLTTKIDNDGESISLAS 70


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 202 SISSGIHRNSFNFFVSKRYNISKNLENMEI 291
           ++  G++RN  NF +      +  L+N+EI
Sbjct: 566 TLKIGVYRNIKNFNIPSILQFNDGLKNLEI 595


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = +3

Query: 495 RQTLAWRRASPVGPG----ARPSSSTSRAED 575
           R  + W+RA+ V PG     +P++   + ED
Sbjct: 727 RPVVTWKRATGVSPGDYKDFKPNNPDIKVED 757


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 176 TKETCDIFLV*VPVFIGTVLIFSY 247
           TK+   I L+   VF+ T L+F Y
Sbjct: 484 TKQQSKIHLIVRSVFVTTYLMFDY 507


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 261 IVPFRYEKIKTVPMNTGTYTRKISQVSF 178
           I+ F Y+ IKT+  +   + RK   +SF
Sbjct: 130 IIAFYYKPIKTLNGHEIKFIRKEEYISF 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,859
Number of Sequences: 336
Number of extensions: 2314
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)