Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30772
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0180 + 2034021-2034023,2034741-2035088 33 0.22
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 32 0.38
02_04_0315 - 21969416-21970756 31 0.87
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 30 1.5
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 30 2.0
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 30 2.0
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 30 2.0
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 2.7
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 29 3.5
01_06_0804 + 32118107-32118541 29 3.5
11_06_0698 + 26385989-26389090 29 4.7
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 4.7
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 29 4.7
01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047... 29 4.7
12_01_0223 + 1708420-1708512,1708790-1709008,1709117-1709330,170... 28 6.2
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 28 6.2
08_02_1630 - 28371925-28372407,28372514-28372714,28372797-28374242 28 8.1
03_05_0373 + 23581812-23583293 28 8.1
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 28 8.1
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 262 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 441
D + ++ LN L + + N EALE+ QN+ R EE +K H +++K L
Sbjct: 24 DAHKDQVKGLNGRISKLNDTIKELNDTI-EALERQVQNLTRYKEEKQKQHANLQKEFAEL 82
Query: 442 REK---LQAAVQN 471
K L AA +N
Sbjct: 83 ERKYRDLDAAHRN 95
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 319 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 498
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 499 KKVSRTCRRLMRN 537
+R+ ++
Sbjct: 575 NLFVTNSQRVKKD 587
>02_04_0315 - 21969416-21970756
Length = 446
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 286 QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAV 465
Q N L + D NG + ALE++ + + E L A + K A+ EK ++A+
Sbjct: 232 QENVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAM 290
Query: 466 QNTVQESQKL 495
+ QE++ L
Sbjct: 291 EALRQENESL 300
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 118 PRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*---LAHQVKGRTGLQQGWKDGSESVLQQ 288
P G + ++ R + VP FR +V L KGR + ++G + +
Sbjct: 32 PAGGGEGSGAAVVPAKRRRERVVPSRFRDSVVSLPLPPAKKGRPAKKAAAREGGDGEVYD 91
Query: 289 LNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATA 438
+ A QGA A G + A+ + +T EEL +A ++ +++++
Sbjct: 92 VEVRAVEQQGATAAAFGAVETAVWPGDERPAQTEEELYRACRNIRRSSSS 141
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 295 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 474
A A + G +G ++ LE+ R+ IER AEE + + E+ A A R + +
Sbjct: 180 AAAAAAAGTKKVGSGPSRVTLERLREGIERRAEE-EERRAEEERRAEAERAAAEERARRE 238
Query: 475 VQESQKLAKKVSR 513
+E + A++ R
Sbjct: 239 EEEGRARAEEERR 251
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 328 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 495
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL 692
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 346 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 489
K+ +QS ERT E + KAH ++ K E +QAA +QE Q
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQ 464
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 316 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 456
G GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 310 LQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES 486
++G L D N G+A AL ++E EEL K D++ L K + V +
Sbjct: 191 MEGHLSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQI 250
Query: 487 QKLAK 501
LAK
Sbjct: 251 ACLAK 255
>01_06_0804 + 32118107-32118541
Length = 144
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 238 TGLQQGWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 411
T L WK G +V+++LNA + G + D N + ++A + Q +ER + H
Sbjct: 13 TSLADDWKTGLAAVIERLNA----IHGQISDLNNQ-QQAHHVAIQRLERAGNDNAPHH 65
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 495 SEEGVSNVQETNEKLAP 545
SEEG+SNV++ EKLAP
Sbjct: 739 SEEGISNVEKIFEKLAP 755
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 325 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAA-VQNTVQESQKL 495
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>05_07_0116 - 27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 274 SVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 453
S +Q L + ++ + A +AN +A EAL Q + + L++ V N TAL KL
Sbjct: 889 STVQVLESLLETEREACAEANRRA-EALSLQLQATQSKLDMLQQELTSVRFNETALDSKL 947
Query: 454 QAA 462
+A+
Sbjct: 948 KAS 950
>01_05_0249 -
19903154-19903454,19904114-19904168,19904707-19904791,
19905140-19905511
Length = 270
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 298 FAKSLQGALG--DANGKAKEALEQSRQNIERTAEELRKAHPDV 420
F KSL G + D +GKAK+ + + + + +EE++ + DV
Sbjct: 184 FEKSLVGQINIEDMSGKAKDVINEEGSSEDGNSEEMKDSDDDV 226
>12_01_0223 +
1708420-1708512,1708790-1709008,1709117-1709330,
1709901-1710001
Length = 208
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/97 (18%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 232 GRTGLQQGWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 411
G TG Q+G + G ES+ Q + + G+ G+ + + + ++ ++
Sbjct: 38 GSTGAQEGVESGMESIKPQPSWMNRKSTVLTGEHKGEISNTADLDQSSEAKSDKKQLSEK 97
Query: 412 PDVEKNATALREKLQAAVQNTVQ-ESQKLAKKVSRTC 519
+++ A + A+Q + E +++ ++ S TC
Sbjct: 98 DEMKSIQEAYAKAYYEAIQKRQEDEDKRMIQEESLTC 134
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 WKDGSESVLQQLNAFAKSLQ--GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVE 423
W D ++ + QQL+ A+++Q G L A+EA +++ E +E+ KA +++
Sbjct: 926 WMDENKGLQQQLSDTAEAVQAAGELLVRLNDAEEAASLAQKRAELAEQEMNKAFAEID 983
>08_02_1630 - 28371925-28372407,28372514-28372714,28372797-28374242
Length = 709
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +1
Query: 322 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 501
LG+A L R+++ R +ELR+ N ++E ++ + V+ S+ +
Sbjct: 133 LGEARRANHLLLGYYRRSVLRGVDELRQKQKQRNNNIIIIKELVRTVLSTIVEASRSVVS 192
Query: 502 KVSRTCRRLMR 534
+ RR R
Sbjct: 193 SEAAEARRWAR 203
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 382 ARCSASTVPKPPW 344
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 301 AKSLQGALGDANGK---AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 471
A+ G +A GK A+EA E++ + + A ELRK + + ATA RE L+A +
Sbjct: 151 AEQEAGRREEAEGKLRAAEEAAERAGKEAQEHAAELRKHRAALAELATARRE-LEAELAR 209
Query: 472 TVQESQKLAKKVSRTCRR 525
+ ++ R
Sbjct: 210 AARRGDAAEAELGEALER 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,916,943
Number of Sequences: 37544
Number of extensions: 273707
Number of successful extensions: 1429
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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