Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30772
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 39 0.004
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 36 0.034
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 33 0.24
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 31 0.55
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 31 0.55
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 31 0.55
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 31 0.55
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 31 0.96
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 30 1.7
At3g50370.1 68416.m05508 expressed protein 30 1.7
At2g48160.1 68415.m06031 PWWP domain-containing protein 30 1.7
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 29 2.2
At1g76020.1 68414.m08826 expressed protein 29 2.2
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.9
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 29 2.9
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 2.9
At1g63680.1 68414.m07206 Mur ligase family protein contains Pfam... 29 3.9
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 28 5.1
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 28 5.1
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 28 5.1
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 28 5.1
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 28 5.1
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 28 5.1
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 28 5.1
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 28 5.1
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 5.1
At1g20225.1 68414.m02526 expressed protein 28 5.1
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 28 5.1
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.8
At3g58840.1 68416.m06558 expressed protein 28 6.8
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 6.8
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 6.8
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 28 6.8
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 6.8
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 6.8
At5g61920.1 68418.m07773 hypothetical protein 27 9.0
At5g33380.1 68418.m03963 hypothetical protein 27 9.0
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 9.0
At3g50100.1 68416.m05477 exonuclease family protein contains exo... 27 9.0
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 27 9.0
At2g22720.3 68415.m02692 expressed protein 27 9.0
At2g22720.2 68415.m02691 expressed protein 27 9.0
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +1
Query: 214 LAHQ--VKGRTGLQQGWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERT 387
L HQ V R GL QG S + F+K ++G D+N + ++ +++ ++
Sbjct: 21 LVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGE-ADSNPEFQKTVKEFKER---- 75
Query: 388 AEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSRTCR 522
AEEL+ D++ EKL Q E++ +AKKVS + +
Sbjct: 76 AEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVK 120
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 310 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE----KLQAAVQNTV 477
L G +A GKA E + +++N+E+ E R+ ++ L+E K Q A Q T
Sbjct: 278 LSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTR 337
Query: 478 QESQKLAKKVSRT 516
+ ++ A+K T
Sbjct: 338 ESTESGAQKAEET 350
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 313 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 489
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 490 KLAKKVSRTCR 522
+K S+T +
Sbjct: 78 SAKEKTSQTAQ 88
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 325 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 501
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 502 KVSRTCR 522
K T +
Sbjct: 71 KAHETAQ 77
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 477
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 478 QESQKLAKK 504
E +LAK+
Sbjct: 766 GEKVQLAKE 774
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 477
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 478 QESQKLAKK 504
E +LAK+
Sbjct: 764 GEKVQLAKE 772
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 477
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 478 QESQKLAKK 504
E +LAK+
Sbjct: 766 GEKVQLAKE 774
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 477
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 478 QESQKLAKK 504
E +LAK+
Sbjct: 766 GEKVQLAKE 774
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 30.7 bits (66), Expect = 0.96
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 349 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSRT 516
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S +
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNS 1055
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 370 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 501
+++E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 358 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKKVSRTCR 522
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++ + +
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRRQAEAAK 586
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 31 PVRISSALSLSTVHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 189
P+R++ LS ST+H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 310 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 489
L G++ ++ +KE E SR + R ++EK +RE++QA + +E++
Sbjct: 28 LSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERVQAQLGRVEEETK 83
Query: 490 KLA 498
+LA
Sbjct: 84 RLA 86
>At1g76020.1 68414.m08826 expressed protein
Length = 225
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 22 LSRPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 147
LSRP + + L TV G +S L+ S +SD ATR S
Sbjct: 129 LSRPAVVEKIVELGTVSLGNSYQSVLKSGFSDKKSDRATRVS 170
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 498
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 499 KKV 507
V
Sbjct: 703 STV 705
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +1
Query: 235 RTGLQQGWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHP 414
+ G+ D ESV + + +S+ DA K +E ++ + + KAH
Sbjct: 205 KEGVAHKAHDAKESVADKAHDAKESVAQKAHDAKEKVREKAHDVKETVAQ------KAHE 258
Query: 415 DVEKNATALREKLQAAVQNTVQESQKLAKKVSRTCR 522
E+ +REK Q + +S+ ++V R
Sbjct: 259 SKERAKDRVREKAQELKETATHKSKNAWERVKNGAR 294
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 581 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 676
H D + GGR+R+ + + E SHL+ SFI
Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86
>At1g63680.1 68414.m07206 Mur ligase family protein contains Pfam
profile: PF01225 Mur ligase family, catalytic domain
Length = 767
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 486 PEVSEEGVSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 629
PE S GVS Q+ + A K +DF KN + I + +A +
Sbjct: 62 PEDSMHGVSKFQQIQRQAARARKLEEEDFEKNRNTYLSAIADVEDAAE 109
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +1
Query: 364 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 507
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGV 56
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 489 EVSEEGVSNVQET---NEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 629
EVSE+ + +V+E NEK K+K+ + + +KK Q+A + Q
Sbjct: 390 EVSEQRLGSVEEEVSKNEKEVEKLKSELETVKEEKNRALKKEQDATSRVQ 439
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 495
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 495
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 459
QQL+ KSL+ + D A+E LEQ + +EE K + VEK A + L
Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272
Query: 460 AVQNTVQESQKLAKK 504
+++ +E Q L K+
Sbjct: 273 SLKELTKELQTLYKE 287
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 301 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 480
AKSL + KAKE EQ++ L A ++E A E+L A ++
Sbjct: 563 AKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALE 620
Query: 481 ESQKLAK 501
ES+ K
Sbjct: 621 ESESTLK 627
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 262 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 441
DG + L QLNA ++L+ + D K + E+ E+ +E + +E ++L
Sbjct: 40 DGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKVASLETEVSSL 98
Query: 442 REKLQAAVQNTVQESQKLAKKVSR 513
R+K + + ++Q A ++ +
Sbjct: 99 RKKGSSDSVELLSKAQARATELEK 122
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 262 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 441
DG + L QLNA ++L+ + D K + E+ E+ +E + +E ++L
Sbjct: 40 DGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKVASLETEVSSL 98
Query: 442 REKLQAAVQNTVQESQKLAKKVSR 513
R+K + + ++Q A ++ +
Sbjct: 99 RKKGSSDSVELLSKAQARATELEK 122
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 301 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 480
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 481 ESQ 489
E++
Sbjct: 570 ETE 572
>At1g20225.1 68414.m02526 expressed protein
Length = 233
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 22 LSRPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 147
+SRP + + L TV G S L+ S +SD ATR S
Sbjct: 130 MSRPAVVEELIKLGTVTLGNSYHSPLKSGFSNSKSDLATRVS 171
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 358 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN---TVQESQKLAKKVS 510
E+ + + R AEE + +++ A R KL+ V N TV + +KLAKK+S
Sbjct: 557 EEEIEEMIREAEEFAEEDKIMKEKIDA-RNKLETYVYNMKSTVADKEKLAKKIS 609
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 406 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 302
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQK 492
KA + + + E+ AE LRK +VEK L K+ ++E K
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSK 178
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 337 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 498
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 337 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 498
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 313 QGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 450
Q AL + + +AL + ER AEE R AH + K A RE+
Sbjct: 369 QAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +1
Query: 289 LNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATALRE 447
L A L+ + + K K+ L++ + I++ E + + D+E+ N++A+ E
Sbjct: 725 LEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSE 784
Query: 448 KLQAAVQNTVQESQKLAKKVS 510
+L A QN+ E+ K ++K S
Sbjct: 785 QLPIARQNSAFENDKFSEKRS 805
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 149 DFFKDIEHHTKEFHKTL-EQQFNSLTKSK 232
D IE TK+ +KT EQ+FN + KSK
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSK 75
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +1
Query: 349 EALEQSRQNIERTAEELRKAHPDVEKNATALREKL------QAAVQNTVQESQKLAKKVS 510
E+LE S Q +ER EE ++ + E+ + EKL + + V+ +KL ++S
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229
Query: 511 RTCRRLMRN 537
+ + N
Sbjct: 230 TARNKAVEN 238
>At5g33380.1 68418.m03963 hypothetical protein
Length = 154
Score = 27.5 bits (58), Expect = 9.0
Identities = 26/87 (29%), Positives = 39/87 (44%)
Frame = +1
Query: 244 LQQGWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVE 423
+ +G DGS+S + L KS +G+A G + + + + ++ EEL A + E
Sbjct: 12 VSRGDIDGSQSDTKPLLQRRKSHPPTIGEAGGSSWQDAPEPQVLLKVKIEELYFAPEETE 71
Query: 424 KNATALREKLQAAVQNTVQESQKLAKK 504
K A A Q T Q K AKK
Sbjct: 72 KLLQAAHVLEIARAQKTKQ--TKKAKK 96
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 379 RCSASTVPKPPWPCRSRLRALPGDSW 302
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g50100.1 68416.m05477 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 406
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 450
Q L+ K LQ L NG KE L +N + ++ R++H D+ + T ++K
Sbjct: 11 QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +1
Query: 286 QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAV 465
QL + L+G +G + + + AL++ + IER ++ E ++ L EKL+
Sbjct: 343 QLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQK--------ETESSDLVEKLKTH- 393
Query: 466 QNTVQESQKLAKKVS 510
+N ++E +KLA + S
Sbjct: 394 ENQIEEYKKLAHEAS 408
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 4 TRPRTCLSRPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTP 174
+RP + S+ + S S ++H R S ++ S P S G+ +SR + G P
Sbjct: 221 SRPSSSGSQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSGSQMQSRAVSGSGRP 277
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 4 TRPRTCLSRPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTP 174
+RP + S+ + S S ++H R S ++ S P S G+ +SR + G P
Sbjct: 324 SRPSSSGSQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSGSQMQSRAVSGSGRP 380
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,492,115
Number of Sequences: 28952
Number of extensions: 200227
Number of successful extensions: 1030
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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