Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30771X
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.29 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.29 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 88  PILGAKDDVAPTSPPT 41
           PIL  K  V+PT+PPT
Sbjct: 85  PILAEKVSVSPTTPPT 100


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 371 SHKDTAPLICSS*SSQFRLHPQGRCCRCV*YFSAFYDHERL 249
           S +++AP IC        L   G  C+C   F+  Y HE +
Sbjct: 29  SGRNSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENI 69


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 213 EQQLSGLVCFELSAA 169
           E+ + GLVCF L A+
Sbjct: 400 EEVVLGLVCFRLKAS 414


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 471  GQTPLLMSSIRSCGGLPSTVHPTDC 397
            G+ PLL +      G PS +  T+C
Sbjct: 2675 GKHPLLKTLNNELRGTPSDISVTNC 2699



 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 471  GQTPLLMSSIRSCGGLPSTVHPTDC 397
            G  PLL S  R  G +P      DC
Sbjct: 979  GSFPLLRSLNRGLGLIPDNPSREDC 1003


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 496 ILETFIHQWSNSAVDVINKIMWRPALHSTSN*LCCAKNLFY 374
           +L+ F++ ++  +V       W P  H+ SN +    +L+Y
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYY 172


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 10  QMKLKS*ICDVSAGKSVPHHLWPLK 84
           Q  ++  +C++S    +P H+W  K
Sbjct: 273 QFNIEMFLCNMSLLTVIPIHVWTSK 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,377
Number of Sequences: 336
Number of extensions: 2621
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)