Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30771X
         (503 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   145   2e-35
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    62   2e-10
Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z81042-4|CAB02796.1|  272|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   3.3  
Z68880-1|CAA93098.1|  652|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    28   4.4  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical...    27   7.7  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  145 bits (351), Expect = 2e-35
 Identities = 66/84 (78%), Positives = 77/84 (91%)
 Frame = +3

Query: 3   FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
           FDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T +LT+
Sbjct: 5   FDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTCKLTI 64

Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
           QNR A+I VVPSAA+LI++ LKEP
Sbjct: 65  QNRVAKIDVVPSAASLIVKELKEP 88



 Score = 97.9 bits (233), Expect = 4e-21
 Identities = 43/69 (62%), Positives = 59/69 (85%)
 Frame = +2

Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLCGSVKEILSTAQSVGCTVEGRPPH 436
           RDRKK KN+KHNG+++++ +I IA+IMR RSMA+ L G+VKEIL TAQSVGCT++G+ PH
Sbjct: 90  RDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPH 149

Query: 437 DLIDDINSG 463
           D+I+ I +G
Sbjct: 150 DIIESIANG 158


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +2

Query: 335 MRNRSMARYLCGSVKEILSTAQSVGCTVEGRPPHDLIDDINSG 463
           MR RSMA+ L G+VKEIL TAQSVGCT++G+ PHD+I+ I +G
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANG 43


>Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical
           protein C27H6.4b protein.
          Length = 331

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 270 SRKISNTTATSPLRM*SELRRS*GTDQWRGIFVAQ*KRFLAQHSQLDVLWRAGR 431
           SR +S TTA S      +L    GTD+ +  + A  KR+ A    +DVLWR  +
Sbjct: 94  SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAK 147


>Z81042-4|CAB02796.1|  272|Caenorhabditis elegans Hypothetical
           protein C27H6.4a protein.
          Length = 272

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 270 SRKISNTTATSPLRM*SELRRS*GTDQWRGIFVAQ*KRFLAQHSQLDVLWRAGR 431
           SR +S TTA S      +L    GTD+ +  + A  KR+ A    +DVLWR  +
Sbjct: 35  SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAK 88


>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
           protein F55B11.1 protein.
          Length = 1358

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
 Frame = -1

Query: 329 SQFRLHPQGRCCRCV*Y---FSAFY----DHERLLKGSDDKGCCRGNN 207
           S   L  QG  CRC  Y     AFY    D    LK +++ GC  G N
Sbjct: 146 SDINLGLQGNLCRCTGYRPILEAFYSFAVDESGTLKVTEENGCGMGEN 193


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 411 HPTDCAVLRISFTEPQRYRAIDL 343
           HPT CAV    F +P +Y  IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313


>Z68880-1|CAA93098.1|  652|Caenorhabditis elegans Hypothetical
           protein T14G10.1 protein.
          Length = 652

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 367 TKIPRH*SVPHDLRNSDYILKGDVAVV 287
           T  PRH +V   L + +++L GDVAVV
Sbjct: 386 TNDPRHPAVAQVLESGNWLLGGDVAVV 412


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 164 DLETLPVTCGLGNVITHLFRRQTKRTDFR 78
           D ++LP+ C LG V+ + ++     TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 88  VLLVCLLKRWVMTL 129
           +L++CLLKRW M L
Sbjct: 180 ILMICLLKRWKMNL 193


>AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical
           protein Y57A10A.28 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -3

Query: 417 TVHPTDCAVLRISFTEPQRYRAIDLF-LMIFAIPITSSREMLPLCLI-FFCFLR 262
           T HPT+  +LR SFT      A  +F L   ++ +T+  +++ LC++ FF + +
Sbjct: 180 TWHPTNHEILRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFK 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,185,399
Number of Sequences: 27780
Number of extensions: 252049
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)