Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30769
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   2.0  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   6.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.0  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 632 RYLFGGKALTLQSIGRGFAR 691
           R+L  GKAL L S+G   +R
Sbjct: 64  RFLMNGKALCLMSLGMFLSR 83


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 632 RYLFGGKALTLQSIGRGFAR 691
           R+L  GKAL L S+G   +R
Sbjct: 64  RFLMNGKALCLMSLGMFLSR 83


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 536 YLTIKMKNINFGRWPFQCQF 477
           Y+ ++++  N G W F C F
Sbjct: 654 YVVLRLRANNPGFWLFHCHF 673


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 16  SELRPERRSYKIKKPRGDPTG 78
           S L   +RS + K+P GD  G
Sbjct: 69  SSLTEGKRSKRSKRPNGDTNG 89


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = -3

Query: 539 IYLTIKMKNINFGRWPFQCQFF*QLR*YFEILITTISILYDIFV*ILYNWYLILNRITYH 360
           +Y  +++  I+F      CQ    L  YFE+ + TI  +   F    + ++     I   
Sbjct: 203 VYHLVEISEIHFDL----CQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFFTTGNIIAT 258

Query: 359 YDYFFEI 339
           YD  F I
Sbjct: 259 YDKQFYI 265


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = -3

Query: 539 IYLTIKMKNINFGRWPFQCQFF*QLR*YFEILITTISILYDIFV*ILYNWYLILNRITYH 360
           +Y  +++  I+F      CQ    L  YFE+ + TI  +   F    + ++     I   
Sbjct: 199 VYHLVEISEIHFDL----CQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFFTTGNIIAT 254

Query: 359 YDYFFEI 339
           YD  F I
Sbjct: 255 YDKQFYI 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,859
Number of Sequences: 336
Number of extensions: 3908
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)