Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30769
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical...    31   0.67 
Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U00047-11|AAU20827.1|  313|Caenorhabditis elegans Hypothetical p...    28   8.2  
U00047-10|AAA50686.1|  471|Caenorhabditis elegans Hypothetical p...    28   8.2  
AF022980-14|AAG24190.1|  332|Caenorhabditis elegans Serpentine r...    28   8.2  

>AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical
           protein Y102A5C.29 protein.
          Length = 347

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -1

Query: 193 PNEFQEKSNMINGINGLMNDTMVYLLWTQYAGIHCVTFDLSGHRVVS 53
           P+ F    ++I GI+ LMN   +Y++W +  G+H   + L+  ++VS
Sbjct: 10  PDGFLLTLHLIGGISLLMNLLTMYMIWFESPGMHGYRYCLTYVQIVS 56


>Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical
           protein T09E8.5 protein.
          Length = 344

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 193 PNEFQEKSNMINGINGLMNDTMVYLLWTQYAGIHCVTFDLSGHRVVS 53
           PN +    ++I GI+  MN   +Y++W Q  G+H   + L+  +V S
Sbjct: 10  PNGYLLTLSIIGGISIPMNLLALYMIWFQSPGMHGYKYCLTYMQVAS 56


>U00047-11|AAU20827.1|  313|Caenorhabditis elegans Hypothetical
           protein ZK418.2b protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = +2

Query: 137 IHKAIYAIYHV*FFLKLIGAMIIFTIIVLVEHEIREIRSSIQSQPVHILISY 292
           +H  + A   +     ++  M I   I ++ HE R I ++++S+ +H++++Y
Sbjct: 124 VHGPVLADSSIVMRAAVVSHMSIGPQIAMISHENRLIFNTLKSRDMHVILTY 175


>U00047-10|AAA50686.1|  471|Caenorhabditis elegans Hypothetical
           protein ZK418.2a protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = +2

Query: 137 IHKAIYAIYHV*FFLKLIGAMIIFTIIVLVEHEIREIRSSIQSQPVHILISY 292
           +H  + A   +     ++  M I   I ++ HE R I ++++S+ +H++++Y
Sbjct: 282 VHGPVLADSSIVMRAAVVSHMSIGPQIAMISHENRLIFNTLKSRDMHVILTY 333


>AF022980-14|AAG24190.1|  332|Caenorhabditis elegans Serpentine
           receptor, class j protein57 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = -3

Query: 542 YIYLTIKMKNINFGRWPFQCQFF*QLR*YFEILITTI-----SILYDIFV*ILYNWYLIL 378
           ++YL    K+ NFG + F   +F      + ++   +     S  Y  F+ + + W+   
Sbjct: 25  FVYLIFTEKSANFGNYRFLLLYFAIFNLIYSVVNVVVPLDIHSYRYCFFLTVRHGWFFEA 84

Query: 377 NRITYH 360
           + I +H
Sbjct: 85  SEINFH 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,868,820
Number of Sequences: 27780
Number of extensions: 345190
Number of successful extensions: 779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)