Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30767
         (360 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.31 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   8.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.8  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 40  KRGFAKLSGQRIPITSNSIDEKRLHKHNIIC 132
           K+   ++  Q + IT  S+DE +  KH + C
Sbjct: 37  KQDIGEILQQIMNITDQSLDEAQARKHTLNC 67


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 225 SWIVQFEGPQEITRVLELFSNSE 157
           SW+  F+G   ITR +  +  S+
Sbjct: 915 SWVAPFDGNSPITRYMIEYKQSK 937


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +1

Query: 184 ASNFL-WPFKLNNPT 225
           AS+F+ WP   NNPT
Sbjct: 228 ASSFVVWPLVENNPT 242


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +1

Query: 184 ASNFL-WPFKLNNPT 225
           AS+F+ WP   NNPT
Sbjct: 228 ASSFVVWPLVENNPT 242


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -2

Query: 122 LCLWSLFS 99
           LC+WS+F+
Sbjct: 55  LCIWSIFN 62


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -1

Query: 111 EPLFINAVGSDWYTLSTQLGESTFVY 34
           E L+       WY  S Q+    F++
Sbjct: 275 EDLYFAIYEMHWYDASKQIQNEVFIF 300


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 236  RQPPVGLFNLKGHRKLLAY 180
            + PPV  F    H K L Y
Sbjct: 1126 KSPPVAGFEESPHSKFLKY 1144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,119
Number of Sequences: 336
Number of extensions: 1942
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)