Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30759
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        25   0.88 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   6.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.2  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = -3

Query: 563 DSIYLSIMRVMLSEQS-FMFYTXXXXXXXXXXXIYFQTPNYLLTKRIYLVLQ*YKNG 396
           D +YL +    L +    MFY             +   P+YLL K + +V   Y+ G
Sbjct: 3   DCLYLDVYTNSLDQSKPVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRVG 59


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 587 DTLRCCCISHSLSSIGSQFIYGIFFNKL 670
           DT     + + L S+G  F+  IF N+L
Sbjct: 153 DTYAASVVGYLLYSLGQVFMLCIFGNRL 180


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 418 YYNDIKMDNVYWEFTKPFL 362
           YY+ +   ++Y+  TKPF+
Sbjct: 267 YYSPLSSRSLYYVNTKPFM 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 520 CSLNITLIIDKYIE 561
           CSLN+   +DK IE
Sbjct: 154 CSLNLETYLDKLIE 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,612
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)