Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30758
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical
           protein T23G4.4 protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 390 LIIVLFLSELIGLNENDMD*PSVHINNGKISMP 292
           LIIVLF+S  I +N++++   + H  +GK   P
Sbjct: 377 LIIVLFISSTILINKDEIGQKNQHSTSGKSGWP 409


>AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical
           protein F37C4.3 protein.
          Length = 685

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -1

Query: 415 KEHISRGKPDYSFIF 371
           +EHI + KPDY+FIF
Sbjct: 519 EEHIRQEKPDYAFIF 533


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,650,013
Number of Sequences: 27780
Number of extensions: 314987
Number of successful extensions: 505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)