Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30757
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              71   8e-15
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.1  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.0  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 71.3 bits (167), Expect = 8e-15
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +1

Query: 601 EMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQPSF 723
           EM        LEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 41


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 539 RAKSFVTSRRSCATSLLTSSRKWPALHPAAPSR 637
           RAKS    R  C T+ +T  R      P++ S+
Sbjct: 250 RAKSIRARRTECVTNSVTCDRPSDEAEPSSTSK 282


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 406 SHTVPIYEGYALPHAILRLDLAGRELTDYLMKI-LTSAATR 525
           +H +  Y GY  P   +  D A  E T+  MK+   SA TR
Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKLGWKSARTR 227


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 351 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHP 455
           ++  +++HR        C P   +L +I + P HP
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHP 96


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 411 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 319
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,236
Number of Sequences: 438
Number of extensions: 5210
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)