Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30756
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    28   0.023
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    28   0.023
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    25   0.28 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   0.66 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.5  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 0.023
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -2

Query: 342 FFFFFMIYNIILLDSKHKRVHVSIILRTKYFSAALCSATIFADSRL 205
           FF+FF   NII    K   +H ++I+R  +    L  AT++  S++
Sbjct: 246 FFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQLW-ATVYTSSQV 290


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 0.023
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -2

Query: 342 FFFFFMIYNIILLDSKHKRVHVSIILRTKYFSAALCSATIFADSRL 205
           FF+FF   NII    K   +H ++I+R  +    L  AT++  S++
Sbjct: 242 FFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQLW-ATVYTSSQV 286


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +2

Query: 98  IRC*CYSTRRDGGCGGRNISLYLVERKEGSPTARSSRRESAKIVAEHSAAEKYFVRKIIL 277
           + C  YS R   G   R   +     K+G+PTA   R  +A   A+ +  +  F     L
Sbjct: 194 VYCTRYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLKHEFAENRYL 253

Query: 278 T 280
           T
Sbjct: 254 T 254


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 0.66
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -2

Query: 303 DSKHKRVHVSIILRTKYFSAALCSATIFADSRLELRAVGEPSFLSTK*REMF 148
           DS H  V VS        S AL +     +   E+RA   P+F S+K + M+
Sbjct: 55  DSFHDHVSVSNTNTEPLLSEALTNLP--GEKWKEMRATLSPAFTSSKIKNMY 104


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 195 AVGEPSFLSTK*REMFRPPQPPS 127
           +V EP+  +T   E  RPP  PS
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPS 420


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 238 MFCYYLRRFAP*APCGGGTFLSFHQV 161
           MF YY+ R      C    FL FH V
Sbjct: 143 MFQYYIGRSFTYYVCNTTIFLIFHSV 168


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 252 FSAALCSATIFADSRLE 202
           F  A+C+ T+FA  + E
Sbjct: 9   FILAICACTVFAQQQAE 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,376
Number of Sequences: 336
Number of extensions: 1661
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)