Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30753
(450 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.76
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.76
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 24 0.76
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.76
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 24 0.76
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 24 0.76
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 2.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 2.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 2.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 2.3
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.8 bits (49), Expect = 0.76
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 86 GYGQRQYVHGRNHDNHDSYPHLHQQ 160
GYG Y H + H +H P +H Q
Sbjct: 78 GYGYGNYYHPQLHSHHG--PPIHHQ 100
Score = 21.0 bits (42), Expect = 5.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 271 HHIGHEEHRYGHWHH 315
HHI ++ +YG+ +H
Sbjct: 53 HHIQQQQLQYGYHNH 67
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.8 bits (49), Expect = 0.76
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 86 GYGQRQYVHGRNHDNHDSYPHLHQQ 160
GYG Y H + H +H P +H Q
Sbjct: 78 GYGYGNYYHPQLHSHHG--PPIHHQ 100
Score = 21.0 bits (42), Expect = 5.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 271 HHIGHEEHRYGHWHH 315
HHI ++ +YG+ +H
Sbjct: 53 HHIQQQQLQYGYHNH 67
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.8 bits (49), Expect = 0.76
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 95 QRQYVHGRNHDNHDSY 142
Q+QY + +NH N ++Y
Sbjct: 356 QQQYYYNKNHPNSENY 371
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.8 bits (49), Expect = 0.76
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 86 GYGQRQYVHGRNHDNHDSYPHLHQQ 160
GYG Y H + H +H P +H Q
Sbjct: 78 GYGYGNYYHPQLHSHHG--PPIHHQ 100
Score = 21.0 bits (42), Expect = 5.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 271 HHIGHEEHRYGHWHH 315
HHI ++ +YG+ +H
Sbjct: 53 HHIQQQQLQYGYHNH 67
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 23.8 bits (49), Expect = 0.76
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 86 GYGQRQYVHGRNHDNHDSYPHLHQQ 160
GYG Y H + H +H P +H Q
Sbjct: 78 GYGYGNYYHPQLHSHHG--PPIHHQ 100
Score = 21.0 bits (42), Expect = 5.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 271 HHIGHEEHRYGHWHH 315
HHI ++ +YG+ +H
Sbjct: 53 HHIQQQQLQYGYHNH 67
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.8 bits (49), Expect = 0.76
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 95 QRQYVHGRNHDNHDSY 142
Q+QY + +NH N ++Y
Sbjct: 304 QQQYYYNKNHPNSENY 319
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 416 NFCCVKKKKE 445
N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 416 NFCCVKKKKE 445
N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 416 NFCCVKKKKE 445
N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 416 NFCCVKKKKE 445
N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,857
Number of Sequences: 336
Number of extensions: 1415
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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