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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30753
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   0.76 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   0.76 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   0.76 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   0.76 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   0.76 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   0.76 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 86  GYGQRQYVHGRNHDNHDSYPHLHQQ 160
           GYG   Y H + H +H   P +H Q
Sbjct: 78  GYGYGNYYHPQLHSHHG--PPIHHQ 100



 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 271 HHIGHEEHRYGHWHH 315
           HHI  ++ +YG+ +H
Sbjct: 53  HHIQQQQLQYGYHNH 67


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 86  GYGQRQYVHGRNHDNHDSYPHLHQQ 160
           GYG   Y H + H +H   P +H Q
Sbjct: 78  GYGYGNYYHPQLHSHHG--PPIHHQ 100



 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 271 HHIGHEEHRYGHWHH 315
           HHI  ++ +YG+ +H
Sbjct: 53  HHIQQQQLQYGYHNH 67


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 95  QRQYVHGRNHDNHDSY 142
           Q+QY + +NH N ++Y
Sbjct: 356 QQQYYYNKNHPNSENY 371


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 86  GYGQRQYVHGRNHDNHDSYPHLHQQ 160
           GYG   Y H + H +H   P +H Q
Sbjct: 78  GYGYGNYYHPQLHSHHG--PPIHHQ 100



 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 271 HHIGHEEHRYGHWHH 315
           HHI  ++ +YG+ +H
Sbjct: 53  HHIQQQQLQYGYHNH 67


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 86  GYGQRQYVHGRNHDNHDSYPHLHQQ 160
           GYG   Y H + H +H   P +H Q
Sbjct: 78  GYGYGNYYHPQLHSHHG--PPIHHQ 100



 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 271 HHIGHEEHRYGHWHH 315
           HHI  ++ +YG+ +H
Sbjct: 53  HHIQQQQLQYGYHNH 67


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 95  QRQYVHGRNHDNHDSY 142
           Q+QY + +NH N ++Y
Sbjct: 304 QQQYYYNKNHPNSENY 319


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 416  NFCCVKKKKE 445
            N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 416  NFCCVKKKKE 445
            N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 416  NFCCVKKKKE 445
            N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 416  NFCCVKKKKE 445
            N CC KKK+E
Sbjct: 1363 NLCCTKKKEE 1372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,857
Number of Sequences: 336
Number of extensions: 1415
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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