BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30751 (706 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 100 1e-21 U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.4 AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.4 AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.4 AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.4 AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical ... 29 4.3 Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 28 7.5 Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 27 9.9 U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical pr... 27 9.9 AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 27 9.9 >AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical protein Y71A12B.1 protein. Length = 246 Score = 100 bits (239), Expect = 1e-21 Identities = 42/57 (73%), Positives = 50/57 (87%) Frame = -1 Query: 676 EGLCIRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIL 506 +G +R+ GGNDKQGFPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVRGCI+ Sbjct: 46 KGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIV 102 Score = 95.9 bits (228), Expect = 2e-20 Identities = 50/84 (59%), Positives = 61/84 (72%) Frame = -3 Query: 506 DANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVL 327 DAN+S L+LVIV+KG EI GLTD +PR+LGPKRASKIRKLFNL+K DDV +YV+ Sbjct: 103 DANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDK 162 Query: 326 PAKEGKENAKPRHKAPKIQRLVTP 255 +G + APKIQRL+TP Sbjct: 163 TFPDG----VTKTIAPKIQRLITP 182 Score = 28.7 bits (61), Expect = 4.3 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 705 VEADQLGDEWKGYV 664 V D LGDEWKGYV Sbjct: 36 VAIDALGDEWKGYV 49 >U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. Length = 6632 Score = 30.3 bits (65), Expect = 1.4 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Frame = -3 Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450 P + +K P DVK P+ + +P +SS + + + + + + Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523 Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276 + P ++ PK +K K S ++++ V K P K ++ A P K Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583 Query: 275 IQRLVTP 255 ++ +P Sbjct: 1584 PEKPASP 1590 >AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated protein 89, isoform a protein. Length = 6632 Score = 30.3 bits (65), Expect = 1.4 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Frame = -3 Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450 P + +K P DVK P+ + +P +SS + + + + + + Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523 Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276 + P ++ PK +K K S ++++ V K P K ++ A P K Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583 Query: 275 IQRLVTP 255 ++ +P Sbjct: 1584 PEKPASP 1590 >AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated protein 89, isoform g protein. Length = 7122 Score = 30.3 bits (65), Expect = 1.4 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Frame = -3 Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450 P + +K P DVK P+ + +P +SS + + + + + + Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523 Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276 + P ++ PK +K K S ++++ V K P K ++ A P K Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583 Query: 275 IQRLVTP 255 ++ +P Sbjct: 1584 PEKPASP 1590 >AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated protein 89, isoform b protein. Length = 8081 Score = 30.3 bits (65), Expect = 1.4 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Frame = -3 Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450 P + +K P DVK P+ + +P +SS + + + + + + Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523 Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276 + P ++ PK +K K S ++++ V K P K ++ A P K Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583 Query: 275 IQRLVTP 255 ++ +P Sbjct: 1584 PEKPASP 1590 >AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical protein Y57A10C.3 protein. Length = 364 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 109 PAFDLFLATHLGFLLSLCKQFSIFSLRGLALSETLLLQSETMTSTL 246 P F ++ +G L+++C Q SIFS+ L + + +L ++ L Sbjct: 70 PFFGIWFELIIGKLITMCYQLSIFSIGNLEIRKFYVLWTDDSNKML 115 >Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical protein F25H5.5 protein. Length = 725 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -1 Query: 397 PKSVSCSTLAKKMMYVVMSSNACSQPRKEKKMLNPDIRHLRS 272 PKS+ S KK + MS+ + + +KM D HL++ Sbjct: 105 PKSLLTSETLKKKLQASMSAKRRKEQEQRRKMYEEDNEHLKA 146 >Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical protein T20B3.15 protein. Length = 349 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 145 FLLSLCKQFSIFSLRGLALSETLLL 219 FL+S FSIF++ G A S+ L+L Sbjct: 283 FLMSTVSVFSIFAIGGFAFSDDLIL 307 >U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical protein ZK328.4 protein. Length = 532 Score = 27.5 bits (58), Expect = 9.9 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 458 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSK-EDDVRRYVVKRVLPAKEGKENAKPRHK 285 Q P + D N R PK K K+ +LS E+D + V P+KE KE K R K Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKE-KEEKKQRTK 166 >AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical protein Y48G1C.5 protein. Length = 1161 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -3 Query: 488 LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 339 L L +K QE+ P +GPK A +IR L L + + +VV Sbjct: 1010 LLLTFGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSERPVFVV 1059 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,499,495 Number of Sequences: 27780 Number of extensions: 290811 Number of successful extensions: 744 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 715 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 743 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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