Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30751
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 100 1e-21
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.4
AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 27 9.9
U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 27 9.9
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 100 bits (239), Expect = 1e-21
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = -1
Query: 676 EGLCIRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIL 506
+G +R+ GGNDKQGFPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVRGCI+
Sbjct: 46 KGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIV 102
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = -3
Query: 506 DANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVL 327
DAN+S L+LVIV+KG EI GLTD +PR+LGPKRASKIRKLFNL+K DDV +YV+
Sbjct: 103 DANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDK 162
Query: 326 PAKEGKENAKPRHKAPKIQRLVTP 255
+G + APKIQRL+TP
Sbjct: 163 TFPDG----VTKTIAPKIQRLITP 182
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 705 VEADQLGDEWKGYV 664
V D LGDEWKGYV
Sbjct: 36 VAIDALGDEWKGYV 49
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Frame = -3
Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450
P + +K P DVK P+ + +P +SS + + + + + +
Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523
Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276
+ P ++ PK +K K S ++++ V K P K ++ A P K
Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583
Query: 275 IQRLVTP 255
++ +P
Sbjct: 1584 PEKPASP 1590
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Frame = -3
Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450
P + +K P DVK P+ + +P +SS + + + + + +
Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523
Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276
+ P ++ PK +K K S ++++ V K P K ++ A P K
Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583
Query: 275 IQRLVTP 255
++ +P
Sbjct: 1584 PEKPASP 1590
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Frame = -3
Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450
P + +K P DVK P+ + +P +SS + + + + + +
Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523
Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276
+ P ++ PK +K K S ++++ V K P K ++ A P K
Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583
Query: 275 IQRLVTP 255
++ +P
Sbjct: 1584 PEKPASP 1590
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Frame = -3
Query: 629 PDETGRPDKQPCSSSDVKGPLMLQTAPRWREKT*ISSWMYFDANLSVLALVIVRKGAQEI 450
P + +K P DVK P+ + +P +SS + + + + + +
Sbjct: 1464 PKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESR 1523
Query: 449 PGLTDGNVPRRLG--PKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 276
+ P ++ PK +K K S ++++ V K P K ++ A P K
Sbjct: 1524 TSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKS 1583
Query: 275 IQRLVTP 255
++ +P
Sbjct: 1584 PEKPASP 1590
>AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical
protein Y57A10C.3 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 109 PAFDLFLATHLGFLLSLCKQFSIFSLRGLALSETLLLQSETMTSTL 246
P F ++ +G L+++C Q SIFS+ L + + +L ++ L
Sbjct: 70 PFFGIWFELIIGKLITMCYQLSIFSIGNLEIRKFYVLWTDDSNKML 115
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 397 PKSVSCSTLAKKMMYVVMSSNACSQPRKEKKMLNPDIRHLRS 272
PKS+ S KK + MS+ + + +KM D HL++
Sbjct: 105 PKSLLTSETLKKKLQASMSAKRRKEQEQRRKMYEEDNEHLKA 146
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 145 FLLSLCKQFSIFSLRGLALSETLLL 219
FL+S FSIF++ G A S+ L+L
Sbjct: 283 FLMSTVSVFSIFAIGGFAFSDDLIL 307
>U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical
protein ZK328.4 protein.
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 458 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSK-EDDVRRYVVKRVLPAKEGKENAKPRHK 285
Q P + D N R PK K K+ +LS E+D + V P+KE KE K R K
Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKE-KEEKKQRTK 166
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 488 LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 339
L L +K QE+ P +GPK A +IR L L + + +VV
Sbjct: 1010 LLLTFGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSERPVFVV 1059
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,499,495
Number of Sequences: 27780
Number of extensions: 290811
Number of successful extensions: 744
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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