Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30750
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.36 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.7  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 273 GNIIPLHHSTSNLDFKHISRWVYIHH 350
           GNI+PL+ S  N+ FK +  W  +++
Sbjct: 50  GNILPLYTSAENI-FKQLREWGRLYY 74


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 724  IKLLLKTFVLFFPAKLAVTSRGLWQCN 644
            IKL++K  ++   +   + + G+W C+
Sbjct: 1150 IKLVIKAIIIMILSGCIIFTEGIWICS 1176


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 576 QEQCFIKSTTGSETRPTEKLSGLVY 502
           +E C +K  T +  +  EKL  +VY
Sbjct: 172 RENCHLKFVTDTLKKELEKLQKIVY 196


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 581 PSKSSAS*NLPLDRKRDPLRSSVGL 507
           P K SA  N P+ +K   +R+ +GL
Sbjct: 517 PEKISAIRNFPVPQKTKHVRAFLGL 541


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,349
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)