Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30749
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0202 - 1513835-1514282,1514506-1514571,1515420-1515508,151...    31   1.3  
05_04_0266 - 19558769-19559275,19560852-19560933,19561354-195618...    30   2.2  
11_01_0541 + 4275660-4275766,4275856-4275973,4276160-4276386,427...    28   6.7  
06_03_0540 - 21923763-21923945,21924027-21924776,21924895-219253...    28   6.7  
03_02_0694 - 10448712-10448996,10449030-10449074,10449588-104496...    28   8.9  
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409...    28   8.9  

>12_01_0202 -
           1513835-1514282,1514506-1514571,1515420-1515508,
           1518011-1518352
          Length = 314

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 318 GWTSTCKTRFSPISAELTWSPDVKLFSWSK*AEGRYWRL-CLLLLTWTH 175
           GW ++       IS E+ W  D + + W    + R+ R+  L+ + W H
Sbjct: 132 GWVTSRVRTSEDISLEIAWGDDARYWRWIYLPDSRFERVAALVFVCWFH 180


>05_04_0266 -
           19558769-19559275,19560852-19560933,19561354-19561865,
           19563113-19563124
          Length = 370

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 457 KRGRQRVACRFQCFQVPRSDNIRFQCNIRVCFGKCVPVNCRGSDAYGKRRKREVTDESTA 636
           K  R+    +    +VP S + +  C +RV  GKC   N +G       RKR  + +S  
Sbjct: 154 KSEREEQCMQLDAKEVPSSSSKKRVCKMRVKLGKCPEHNLQGRCTLHITRKRGSSTDSIG 213

Query: 637 L 639
           +
Sbjct: 214 M 214


>11_01_0541 +
           4275660-4275766,4275856-4275973,4276160-4276386,
           4276505-4276729,4276902-4277052,4277139-4277345,
           4277442-4277520,4277605-4277723
          Length = 410

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 506 PVVTIYDSNATFASALENAYRLTVAVRTHTVNEE 607
           P+  I+DS AT+       Y+ T++V   T+N E
Sbjct: 251 PMAVIFDSGATYTYFAAQPYQATLSVVKSTLNSE 284


>06_03_0540 -
           21923763-21923945,21924027-21924776,21924895-21925323,
           21925509-21925619,21925715-21926040,21926130-21926251,
           21926905-21927020,21927119-21927243,21927338-21927596
          Length = 806

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 648 RHRQSGAFVGHFSFSSFTVCVRTATVNRYAFSKADANVALE 526
           RHR +  F      S  + CVRT +++  +FS+   N  L+
Sbjct: 193 RHRLTIKFANQARTSKSSACVRTQSISHKSFSRIQKNWLLD 233


>03_02_0694 -
           10448712-10448996,10449030-10449074,10449588-10449647,
           10449817-10449890,10451056-10451149,10451851-10452023,
           10452526-10452598
          Length = 267

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -3

Query: 442 ENSGVLSTTVLVCYKILIFYVS 377
           +++G +STTV +C  I++FY +
Sbjct: 134 QSNGTISTTVFLCASIVLFYTN 155


>01_05_0633 +
           23840427-23840562,23840699-23840768,23840846-23840951,
           23841086-23841184,23841320-23841442,23841555-23842691
          Length = 556

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 237 MRIIS-RLETKSVPQK*ERTSFYKLMSNHLVST 332
           MR++S +L  KSVP++   T    L++NHL ST
Sbjct: 207 MRLLSQKLSLKSVPEENTTTGKKDLVTNHLSST 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,091,329
Number of Sequences: 37544
Number of extensions: 426250
Number of successful extensions: 1180
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)