Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30749
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 27 0.24
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 27 0.24
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 2.3
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 5.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 5.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.9
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.1
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 26.6 bits (56), Expect = 0.24
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 204 IANTGPPPTCSMRIISRLETKSVPQK*ERTSFYKLMSNHLV 326
I NT P S +I+ LET SV K +F ++ HL+
Sbjct: 180 ITNTSGPGVVSNPMIAELETLSVEPKVSPMTFCRVFPFHLM 220
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 26.6 bits (56), Expect = 0.24
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 204 IANTGPPPTCSMRIISRLETKSVPQK*ERTSFYKLMSNHLV 326
I NT P S +I+ LET SV K +F ++ HL+
Sbjct: 180 ITNTSGPGVVSNPMIAELETLSVEPKVSPMTFCRVFPFHLM 220
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 636 FDDAGRSTSRGGDRRIEPNTND 701
FD+ GRS +G I+ N ND
Sbjct: 20 FDEGGRSYGKGRGFIIQNNNND 41
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 657 TSRGGDRRIEPNTNDAATRTVTSGSA 734
T+RGG ++ P N A + GSA
Sbjct: 101 TNRGGSPKLTPYPNWAQNKAGACGSA 126
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 253 VWRPSQFRRNRREPRFTS 306
VWRP N +P+++S
Sbjct: 87 VWRPDTILYNNADPQYSS 104
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 155 KRNSCIQCVHVNNSRHNRQ 211
+RNSC+ S+HN Q
Sbjct: 375 RRNSCLGSTETYYSKHNTQ 393
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 141 KTGEQNVTLAFNVSMLTTAGTIANT 215
K Q++T NVS LTT T N+
Sbjct: 711 KESTQSLTTTGNVSYLTTNNTSNNS 735
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.9
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 74 SNANSSETGNINHKSIPHQMHIQNW*TKRNSCIQCVHVNNSRHNRQYRPSAYLLHEN 244
S+A++S H M + + R+ I H + H Y+ S YL++EN
Sbjct: 37 SSASNSPDHYERFSPSTHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYEN 93
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 213 YWRLCLLLL 187
YW LC+LLL
Sbjct: 90 YWDLCMLLL 98
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 213 YWRLCLLLL 187
YW LC+LLL
Sbjct: 90 YWDLCMLLL 98
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 213 YWRLCLLLL 187
YW LC+LLL
Sbjct: 90 YWDLCMLLL 98
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,139
Number of Sequences: 438
Number of extensions: 4569
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -