Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30748
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   149   9e-38
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  149 bits (361), Expect = 9e-38
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MAFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 206
           M FVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 207 TCQVAYSRIEGDHIVC 254
           TCQ+AY RIEGD IVC
Sbjct: 61  TCQIAYRRIEGDRIVC 76



 Score =  128 bits (310), Expect = 1e-31
 Identities = 54/69 (78%), Positives = 64/69 (92%)
 Frame = +1

Query: 511 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 690
           MKGAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQ
Sbjct: 163 MKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQ 222

Query: 691 FSKYIKLGV 717
           FSKYI LG+
Sbjct: 223 FSKYISLGI 231



 Score =  107 bits (256), Expect = 5e-25
 Identities = 53/84 (63%), Positives = 54/84 (64%)
 Frame = +2

Query: 257 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 436
           AYSHELPRYGVKVGLTNYAAAY TG                          EY VEPVD 
Sbjct: 78  AYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDE 137

Query: 437 GPGAFRCYLDVGLARTTTGARVFG 508
           GP AFRCYLDVGLARTTTG+RVFG
Sbjct: 138 GPAAFRCYLDVGLARTTTGSRVFG 161


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 369 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 452
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,414
Number of Sequences: 2352
Number of extensions: 17010
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)