Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30748
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   134   8e-32
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    29   4.5  
L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U23183-2|AAA64339.2|   89|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  134 bits (323), Expect = 8e-32
 Identities = 60/75 (80%), Positives = 67/75 (89%)
 Frame = +3

Query: 27  MAFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 206
           M  VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 207 TCQVAYSRIEGDHIV 251
             Q+AYS+IEGD +V
Sbjct: 61  VAQLAYSKIEGDVVV 75



 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 511 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 690
           MKG  DGG+NVPHS  RF G+D ESK++NAE HR  I G HVA+YM  L+++DED +KRQ
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQ 221

Query: 691 FSKYIKLGV 717
           FSK++  G+
Sbjct: 222 FSKFLAAGL 230



 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 39/85 (45%), Positives = 49/85 (57%)
 Frame = +2

Query: 257 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 436
           AYSHELPRYG+KVGLTNYAAAY+TG                          +YNVE  + 
Sbjct: 78  AYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EG 136

Query: 437 GPGAFRCYLDVGLARTTTGARVFGL 511
               F+  LD+GLARTTTG+++F +
Sbjct: 137 DRAPFKAVLDIGLARTTTGSKIFAV 161


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +1

Query: 508 TMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 687
           T  G V G  N+   + +  GYD     FN+E+  A  +     E   + E +D  + K 
Sbjct: 266 TFNGTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAAFKYNA-TTETFLTFETNDTIAAKI 324

Query: 688 QFSKYIKLG 714
            + K   LG
Sbjct: 325 DYVKDRILG 333


>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
 Frame = +1

Query: 424 TCRQWTRSI*MLFGCRLSTHHYWCSCLWTMKGAVDGGLNVPHSIKRFPG----YDAESKK 591
           TC+Q T +   +F C    +   C  +   +  +DG   + +S K FP      +    K
Sbjct: 96  TCQQMTATEQWIFLCAAHKNPNECPAIDYTRHTLDGAATLLNSNKYFPSRVNIKEISISK 155

Query: 592 FNAEVHRAHIFGLHVAEYMRSL--EQDDEDSFKRQFSKYI-KLGVMQ 723
             +   R +    H   + R L  E ++E    ++F+ Y+ K  +MQ
Sbjct: 156 LGSVARRVYRIFSHAFFHHRKLFDEFENETHLCKRFTTYVSKYNLMQ 202


>U23183-2|AAA64339.2|   89|Caenorhabditis elegans Hypothetical
           protein K01A12.2 protein.
          Length = 89

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 359 FEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQAHNMVTF 234
           F  +F++       LQ+   D P HH+  T   ++AH    F
Sbjct: 23  FRLLFLIFFQSAYFLQNFFLDPPLHHSTTTREWERAHRACVF 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,794,413
Number of Sequences: 27780
Number of extensions: 359218
Number of successful extensions: 856
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)