Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30747
(735 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein. 80 3e-15
AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p pro... 80 3e-15
AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB... 80 3e-15
BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p pro... 70 4e-12
AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA... 70 4e-12
AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC... 45 9e-05
U06459-1|AAC46480.1| 592|Drosophila melanogaster transcription ... 30 3.8
L25443-1|AAA16536.1| 592|Drosophila melanogaster TAFII60 protein. 30 3.8
AY051702-1|AAK93126.1| 606|Drosophila melanogaster LD24529p pro... 30 3.8
AE014296-3177|AAF49139.2| 606|Drosophila melanogaster CG32211-P... 30 3.8
>S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein.
Length = 608
Score = 80.2 bits (189), Expect = 3e-15
Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +3
Query: 69 SMATITMNPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 245
SMAT+ M P+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 246 WV 251
++
Sbjct: 67 YL 68
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMN 184
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 115
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 116 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 157
>AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p
protein.
Length = 608
Score = 80.2 bits (189), Expect = 3e-15
Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +3
Query: 69 SMATITMNPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 245
SMAT+ M P+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 246 WV 251
++
Sbjct: 67 YL 68
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMN 184
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 115
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 116 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 157
>AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB,
isoform B protein.
Length = 608
Score = 80.2 bits (189), Expect = 3e-15
Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +3
Query: 69 SMATITMNPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 245
SMAT+ M P+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 246 WV 251
++
Sbjct: 67 YL 68
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMN 184
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 115
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 116 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 157
>BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p
protein.
Length = 617
Score = 69.7 bits (163), Expect = 4e-12
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 9/70 (12%)
Frame = +3
Query: 69 SMATITMNPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 221
SMAT+ M P+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 222 GTFILASSWV 251
G+FILASS++
Sbjct: 68 GSFILASSYL 77
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMN 193
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 124
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 125 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 166
>AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA,
isoform A protein.
Length = 617
Score = 69.7 bits (163), Expect = 4e-12
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 9/70 (12%)
Frame = +3
Query: 69 SMATITMNPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 221
SMAT+ M P+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 222 GTFILASSWV 251
G+FILASS++
Sbjct: 68 GSFILASSYL 77
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMN 193
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 124
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 125 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 166
>AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC,
isoform C protein.
Length = 625
Score = 45.2 bits (102), Expect = 9e-05
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 141 AYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWV 251
AY+ R + SV+IAKI A T++ S+FILG+FILASS++
Sbjct: 50 AYK-RQANSVKIAKITAFTIIVSAFILGSFILASSYL 85
Score = 35.9 bits (79), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 624 KLPIQFDLDELAGAFLANNQKGRMN 698
K+P++ DL +LA A L NN+K RMN
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMN 201
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 218 LGNLYIGFELGSTRSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV 397
LG+ + ++SC Q++ LD++L++EL LE L EPL A A
Sbjct: 75 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD-- 132
Query: 398 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKF 523
L S+ PE+ + +++ + D N D +KF
Sbjct: 133 DSELQSLEPESRKTEATQDAEEHPDKDNSYSDSDETDELQKF 174
>U06459-1|AAC46480.1| 592|Drosophila melanogaster transcription
initiation factorTFIID 62 kDa subunit protein.
Length = 592
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 386 LHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKFATIRMTHQTRVMRV 565
LH + P + + + S+ RP L AL S++ C+ F T+ QTRV R+
Sbjct: 282 LHELIPSVMTCI--VSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRI 339
Query: 566 LSPTVLLKRT 595
S + +T
Sbjct: 340 FSKALQNDKT 349
>L25443-1|AAA16536.1| 592|Drosophila melanogaster TAFII60 protein.
Length = 592
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 386 LHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKFATIRMTHQTRVMRV 565
LH + P + + + S+ RP L AL S++ C+ F T+ QTRV R+
Sbjct: 282 LHELIPSVMTCI--VSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRI 339
Query: 566 LSPTVLLKRT 595
S + +T
Sbjct: 340 FSKALQNDKT 349
>AY051702-1|AAK93126.1| 606|Drosophila melanogaster LD24529p
protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 386 LHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKFATIRMTHQTRVMRV 565
LH + P + + + S+ RP L AL S++ C+ F T+ QTRV R+
Sbjct: 296 LHELIPSVMTCI--VSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRI 353
Query: 566 LSPTVLLKRT 595
S + +T
Sbjct: 354 FSKALQNDKT 363
>AE014296-3177|AAF49139.2| 606|Drosophila melanogaster CG32211-PA
protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 386 LHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDNCRKFATIRMTHQTRVMRV 565
LH + P + + + S+ RP L AL S++ C+ F T+ QTRV R+
Sbjct: 296 LHELIPSVMTCI--VSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRI 353
Query: 566 LSPTVLLKRT 595
S + +T
Sbjct: 354 FSKALQNDKT 363
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,547,141
Number of Sequences: 53049
Number of extensions: 693220
Number of successful extensions: 3113
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3103
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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