Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30746
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.2  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 268 RFYTCGDTITLPFLFSAEYFSKSISKKFNR 179
           ++Y  G T+   F+F A+  ++S +  F +
Sbjct: 302 KYYKSGSTVPFNFMFIADLNNQSTASDFKQ 331


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 10  GSIYSVTFYPPRKYI*TNDFGK*LNISAQSCVC*YVLS*LSPAF 141
           G+I S+ FY   +Y+  +      NI A   VC  + S L P F
Sbjct: 339 GAIGSIVFYIISRYVFRSALEDYCNIVATHLVCGILGSILVPFF 382


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 150 PTSEGWRKLR 121
           P S GWRKLR
Sbjct: 214 PKSSGWRKLR 223


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 591 FYCRSSANQRFDR 629
           FYC ++ N  FDR
Sbjct: 313 FYCAATKNPNFDR 325


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 202 SISKKFNREYSARVSRQSNV*RLAKATT 119
           +++K  N EY   VSR+SN  +    TT
Sbjct: 444 TMNKINNHEYKRSVSRESNSNQFILMTT 471


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 578 LVFPLTQAFICCATTPLLPK 519
           ++  +  AFI C T PLL K
Sbjct: 312 IIVGMIGAFITCFTMPLLDK 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,284
Number of Sequences: 438
Number of extensions: 3438
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)