Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30745
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 1.1
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 30 1.5
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.0
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 4.6
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical pr... 27 8.0
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 27 8.0
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 207 KRANVPQKARELKSHIRKPSRPTALNAPKRKRGGNRKDDWSPHQP 341
K+ + ++ R + + R R + + R R GN +D W QP
Sbjct: 99 KKGEIEERVRSVAAPDRDGRRDSYRDDRNRNRNGNNRDSWQQQQP 143
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/96 (26%), Positives = 46/96 (47%)
Frame = +1
Query: 190 RTLHPRKGPMYRRRQGNLNLTSGSPRDQLR*MHQSAKGVGTEKMIGHLINHEAEFWEELK 369
R L+P + + G+L+LT +D++ +S G+ ++M+G L+N+E +K
Sbjct: 182 RELYPVLRSIATLQAGSLHLT----KDEI----ESISGLDVKQMMGSLMNNEG-----MK 228
Query: 370 AKYDPTN*FTKKYETELKRVTA*IPLKKANSSISCN 477
Y+ T +K TE V + N ++CN
Sbjct: 229 GFYEQTREINRKRLTEKTNVVEAFGQEVVNFELACN 264
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 313 EKMIGHLINHEAEFWEELKAKYDPTN*FTKKYETELKRVTA 435
E+M+ L++ ++ EEL+ K D TK+YE EL++V A
Sbjct: 81 EEMLTFLVDASKKYDEELEEKRDENKKATKEYE-ELEKVAA 120
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 198 ASSKRANVPQKARELKSHIRKPSRPTALNAPKRKRGGNRKDDWSPHQPRS 347
A +K+ + K +E+ + KP+ P+ APK+ R D P +P +
Sbjct: 30 APAKKPSETPKPKEVPKELPKPAEPSKPAAPKKWRPPWEDDPDEPEEPEA 79
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = +3
Query: 99 SPRSP*TVHRQIPHSRSGPAHI*PSGSSFPTYIASSKRANVPQKARELKSHIR------K 260
SP P RQ+P + GP H + + T +S A PQ++ + H+ +
Sbjct: 224 SPTGPIGYERQVPSFKEGPDH---QYTKYST--LNSPPAPSPQESSTITHHVSTSPDFLE 278
Query: 261 PSRPTALNAPKRKRGGNRKDDWSP 332
PS +++ PK+ G N SP
Sbjct: 279 PSSESSVLLPKQAPGTNPSTSNSP 302
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = +3
Query: 99 SPRSP*TVHRQIPHSRSGPAHI*PSGSSFPTYIASSKRANVPQKARELKSHIR------K 260
SP P RQ+P + GP H + + T +S A PQ++ + H+ +
Sbjct: 549 SPTGPIGYERQVPSFKEGPDH---QYTKYST--LNSPPAPSPQESSTITHHVSTSPDFLE 603
Query: 261 PSRPTALNAPKRKRGGNRKDDWSP 332
PS +++ PK+ G N SP
Sbjct: 604 PSSESSVLLPKQAPGTNPSTSNSP 627
>Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical
protein ZC376.7c protein.
Length = 474
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 323 LVTSSTTKPNSGRS*RPNTIPPTSS 397
L+TSST+ P+SG S IPP SS
Sbjct: 251 LMTSSTSSPDSGISLYDPMIPPPSS 275
>Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical
protein ZC376.7b protein.
Length = 472
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 323 LVTSSTTKPNSGRS*RPNTIPPTSS 397
L+TSST+ P+SG S IPP SS
Sbjct: 249 LMTSSTSSPDSGISLYDPMIPPPSS 273
>Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical
protein ZC376.7a protein.
Length = 488
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 323 LVTSSTTKPNSGRS*RPNTIPPTSS 397
L+TSST+ P+SG S IPP SS
Sbjct: 265 LMTSSTSSPDSGISLYDPMIPPPSS 289
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 169 RRAPHSLRTLHPRKGPMYRRRQGNLNLTSGSPRDQLR*MHQ 291
++ P S+ T ++ M + +Q N N+ +GSP Q HQ
Sbjct: 678 QQGPSSMNTPPQQQMRMQQIQQNNQNMNNGSPHQQQPLQHQ 718
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,874,602
Number of Sequences: 27780
Number of extensions: 323893
Number of successful extensions: 759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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