Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30743
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   146   2e-35
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   146   2e-35
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   146   2e-35
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   146   2e-35
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   144   1e-34
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...   105   6e-23
BT022896-1|AAY55312.1|  421|Drosophila melanogaster IP12536p pro...    29   8.1  
AY061167-1|AAL28715.1|  421|Drosophila melanogaster LD13269p pro...    29   8.1  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  146 bits (355), Expect = 2e-35
 Identities = 68/87 (78%), Positives = 74/87 (85%)
 Frame = +1

Query: 256 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 435
           FRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 436 GFTNKDSLSQRKTCYAQHTQVRAIKRK 516
           GFT KD  SQRKTCYAQ +QVR I+ +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170



 Score =  105 bits (253), Expect = 4e-23
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = +2

Query: 68  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 247
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 248 ER 253
           ER
Sbjct: 81  ER 82


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  146 bits (355), Expect = 2e-35
 Identities = 68/87 (78%), Positives = 74/87 (85%)
 Frame = +1

Query: 256 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 435
           FRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 436 GFTNKDSLSQRKTCYAQHTQVRAIKRK 516
           GFT KD  SQRKTCYAQ +QVR I+ +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170



 Score =  105 bits (253), Expect = 4e-23
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = +2

Query: 68  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 247
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 248 ER 253
           ER
Sbjct: 81  ER 82



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 513 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 677
           +M +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLK+P
Sbjct: 170 RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  146 bits (355), Expect = 2e-35
 Identities = 68/87 (78%), Positives = 74/87 (85%)
 Frame = +1

Query: 256 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 435
           FRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93

Query: 436 GFTNKDSLSQRKTCYAQHTQVRAIKRK 516
           GFT KD  SQRKTCYAQ +QVR I+ +
Sbjct: 94  GFTAKDQQSQRKTCYAQQSQVRKIRAR 120



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 513 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 677
           +M +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLK+P
Sbjct: 120 RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 174



 Score = 34.7 bits (76), Expect = 0.12
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 197 GRVFEVSLADLQADTDAER 253
           GRVFEVSLADLQ D D ER
Sbjct: 14  GRVFEVSLADLQKDIDPER 32


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  146 bits (355), Expect = 2e-35
 Identities = 68/87 (78%), Positives = 74/87 (85%)
 Frame = +1

Query: 256 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 435
           FRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 436 GFTNKDSLSQRKTCYAQHTQVRAIKRK 516
           GFT KD  SQRKTCYAQ +QVR I+ +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170



 Score =  105 bits (253), Expect = 4e-23
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = +2

Query: 68  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 247
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 248 ER 253
           ER
Sbjct: 81  ER 82



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 513 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 677
           +M +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLK+P
Sbjct: 170 RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  144 bits (349), Expect = 1e-34
 Identities = 67/85 (78%), Positives = 72/85 (84%)
 Frame = +1

Query: 256 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 435
           FRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144

Query: 436 GFTNKDSLSQRKTCYAQHTQVRAIK 510
           GFT KD  SQRKTCYA  +QVR I+
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169



 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
 Frame = +2

Query: 68  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 244
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 245 AE 250
            E
Sbjct: 81  PE 82



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 513 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 677
           +M +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLK+P
Sbjct: 172 RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 226


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score =  105 bits (252), Expect = 6e-23
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +1

Query: 322 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 501
           MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60

Query: 502 AIKRK 516
            I+ +
Sbjct: 61  KIRAR 65



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 513 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 677
           +M +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLK+P
Sbjct: 65  RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 119


>BT022896-1|AAY55312.1|  421|Drosophila melanogaster IP12536p
           protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 487 HTQVRAIKRKCVKSLHATSLTLNSGRW*TS*FLTPLPRTSR 609
           H QV      CV+SL   S T+ +G W T      LP   R
Sbjct: 198 HKQVVLTAAHCVESLRTGSFTVRAGEWDTQTMKERLPYQER 238


>AY061167-1|AAL28715.1|  421|Drosophila melanogaster LD13269p
           protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 487 HTQVRAIKRKCVKSLHATSLTLNSGRW*TS*FLTPLPRTSR 609
           H QV      CV+SL   S T+ +G W T      LP   R
Sbjct: 198 HKQVVLTAAHCVESLRTGSFTVRAGEWDTQTMKERLPYQER 238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,580,646
Number of Sequences: 53049
Number of extensions: 714893
Number of successful extensions: 2026
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)