Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30742
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 33 0.20
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 33 0.20
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 33 0.20
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 33 0.20
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 31 1.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.4
L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical pr... 29 2.4
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 29 3.2
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 29 3.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.2
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 3.2
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 29 3.2
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 7.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 9.8
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 9.8
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 178
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 179 KIDLHSSKAVN---FVGNYWQTN 238
+++ + +N ++ N W+T+
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKTH 97
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 178
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 7 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 66
Query: 179 KIDLHSSKAVN---FVGNYWQTN 238
+++ + +N ++ N W+T+
Sbjct: 67 NVEIEYPECLNKMKWIKNGWKTH 89
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 178
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 179 KIDLHSSKAVN---FVGNYWQTN 238
+++ + +N ++ N W+T+
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKTH 97
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 178
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 179 KIDLHSSKAVN---FVGNYWQTN 238
+++ + +N ++ N W+T+
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKTH 97
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 81 TPRRTTKKFASSTFMRRHSSNTSSK--VTSRPSTKKLICTVAKQSTLWATTGRRTPI-YS 251
+P TT ++T + + T++ T+RP T K T +T TT RR PI +
Sbjct: 354 SPPTTTTTLQTTTTRPQTTKTTTTPQTTTTRPQTTKTTTTPQTTTTRLQTT-RRPPIRVT 412
Query: 252 KRLPPILP 275
RLP ++P
Sbjct: 413 PRLPTVIP 420
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 69 TTSCTPRRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTP-- 242
TT+ TP+ TT S++ +++T++ T +P+T T K TL T P
Sbjct: 614 TTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTT---TTTSEKPVTLTTQTWTAPPTT 670
Query: 243 IYSKRLPPILPAFLPG*RSPRTW 311
+ P +P P + PR W
Sbjct: 671 TVKRTTPQTVPTTTP--KIPRWW 691
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 69 TTSCTPRRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTP-- 242
TT+ TP+ TT S++ +++T++ T +P+T T K TL T P
Sbjct: 614 TTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTT---TTTSEKPVTLTTQTWTAPPTT 670
Query: 243 IYSKRLPPILPAFLPG*RSPRTW 311
+ P +P P + PR W
Sbjct: 671 TVKRTTPQTVPTTTP--KIPRWW 691
>L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical
protein C30A5.10b protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 496 SDVKATKWSHSLTISTSMPSTLST---SVKKNSRTLLTVTRS 612
S +T + + T +T+MP T T SVKKN+ TL T ++S
Sbjct: 87 STFPSTTTASTTTSTTTMPPTYQTTTKSVKKNTETLWTTSKS 128
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 496 SDVKATKWSHSLTISTSMPSTLST---SVKKNSRTLLTVTRS 612
S +T + + T +T+MP T T SVKKN+ TL T ++S
Sbjct: 87 STFPSTTTASTTTSTTTMPPTYQTTTKSVKKNTETLWTTSKS 128
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 520 SHSLTISTSMPSTLSTSVKKNSRTLLTVTRSVNHVLTTSRS 642
S+SLT +S ++ T KK S L + +NH+ +T RS
Sbjct: 20 SNSLTHLSSSSTSSETPNKKKSTVFLPSSSFINHIKSTERS 60
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 48 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 152
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 48 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 152
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 50 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 145
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 50 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 145
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 451 VPYTQEALHFVGLKISDVKATKWSHSLTISTSMPSTLSTSVKKNSRT 591
+P T A G ISDV + + +S+S+PST+ +S + S T
Sbjct: 1356 IPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSST 1402
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Frame = +3
Query: 54 PKEAMTTSCTPRRTTKKFASSTFMR----RHSSNTSSKVTSRPSTKK---LICTVAK--- 203
P MTTS TP TT F +ST + + S+ T TS P+T+ L T A+
Sbjct: 207 PNIPMTTSTTPTTTTSTFPTSTTEKSTTAQPSTTTKPTTTSPPTTQVKTILPATEAQKIF 266
Query: 204 ---QSTLWATTGR 233
Q +W TT R
Sbjct: 267 TKPQYQIWPTTTR 279
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 520 SHSLTISTSMPSTLSTSVKKNSRTLLTVTRSVNHVLTTSRS 642
S+SLT +S ++ T KK S L + +NH+ +T RS
Sbjct: 20 SNSLTHLSSSSTSSETPNKKKSTVFLPSSSFINHIKSTERS 60
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 689 DDGVSGNIRFNIDCHSERLVVKTWLTDLVTVRRVLEFFFTEVDSVEGIEVEMVKECDHFV 510
DDG+ GN + D + ERL KT + + + V F ++ V GI +++ D +
Sbjct: 221 DDGLKGNYKQTRDINPERLKEKTDIVEAFGMEVVNFEFAGNLNKVVGIHKDVLVHGDLWA 280
Query: 509 A 507
A
Sbjct: 281 A 281
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 81 TPRRTTKKFASSTFMRRHSSNTSSKVTSRPS-TKKLICTVAKQSTLWATTGRRT 239
T R TTK+ ++ + ++ T + RP+ TK + + K++T +TT R T
Sbjct: 292 TTRTTTKRLTTTKATLKTTTKTLPVIPPRPNVTKPITRSTTKRTTTRSTTKRLT 345
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 220 QLLADERRSIRRDFLQFYQRSYQVNARRVLGAAPKPFNQY 339
Q+ A++RR++ ++ +FY + + +N +L P FN Y
Sbjct: 1302 QMYAEDRRAVFQEPWEFYTKKHNIN---LLREKPSHFNSY 1338
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 6161 VELFFSQAEVFSGLELDLLMECSEYV 6186
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 5235 VELFFSKAEVFSGLELDLLMECSEYV 5260
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 6181 VELFFSQAEVFSGLELDLLMECSEYV 6206
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 5235 VELFFSKAEVFSGLELDLLMECSEYV 5260
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 6181 VELFFSQAEVFSGLELDLLMECSEYV 6206
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 587 LEFFFTEVDSVEGIEVEMVKECDHFV 510
+E FF++ + G+E++++ EC +V
Sbjct: 5235 VELFFSKAEVFSGLELDLLMECSEYV 5260
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +3
Query: 18 TSRLSTPFIIHLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLI--- 188
T+ TP P +TTS TP ++ ST +S +S ST ++
Sbjct: 176 TTSTITPTTSADPTSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQST 235
Query: 189 CTVAKQSTLWATT 227
T ST+ +TT
Sbjct: 236 TTAEPTSTITSTT 248
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 220 QLLADERRSIRRDFLQFYQRSYQVNARRVLGAAPKPFNQY 339
Q+ A++RR++ ++ +FY + + +N +L P FN Y
Sbjct: 1302 QMYAEDRRAVFQEPWEFYTKKHNIN---LLREKPSHFNSY 1338
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 220 QLLADERRSIRRDFLQFYQRSYQVNARRVLGAAPKPFNQY 339
Q+ A++RR++ ++ +FY + + +N +L P FN Y
Sbjct: 1302 QMYAEDRRAVFQEPWEFYTKKHNIN---LLREKPSHFNSY 1338
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 18 TSRLSTPFIIHLPKEAMTTSC-TPRR-TTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 191
TS + P AM+TS TP TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTI-- 348
Query: 192 TVAKQSTLWATT 227
T + ST +T+
Sbjct: 349 TSSPSSTTLSTS 360
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 18 TSRLSTPFIIHLPKEAMTTSC-TPRR-TTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 191
TS + P AM+TS TP TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTI-- 348
Query: 192 TVAKQSTLWATT 227
T + ST +T+
Sbjct: 349 TSSPSSTTLSTS 360
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 17 YLPPFNSFYYPFAQRSNDYELHTEKNYEEIRFLDIYEKTFFQYLQQGH-FKAFDKKIDLH 193
Y+PP ++ + S Y N E +F YEK +F L K DK I +
Sbjct: 143 YIPPGWDEWHAIVKNSKFYNYTMNSNGEREKFGSEYEKDYFTDLVTNRSLKFIDKHIKIR 202
Query: 194 SSKAVNFVGNY 226
+ + + +Y
Sbjct: 203 AWQPFALIISY 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,384,634
Number of Sequences: 27780
Number of extensions: 318188
Number of successful extensions: 1180
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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