Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30740X
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118291-1|AAM48320.1|  677|Drosophila melanogaster AT28382p pro...    35   0.082
AE014134-2024|AAF53064.1|  677|Drosophila melanogaster CG16854-P...    35   0.082
AY118576-1|AAM49945.1|  509|Drosophila melanogaster LD43196p pro...    29   4.1  
AE014296-3360|AAF51595.2|  509|Drosophila melanogaster CG5262-PA...    29   4.1  

>AY118291-1|AAM48320.1|  677|Drosophila melanogaster AT28382p
           protein.
          Length = 677

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
 Frame = +3

Query: 369 NRASPRYKGLIHGR-HVNLSV-----FFNVIDIGRVINNITVVKQQTDASNEHT 512
           NRA  R    I G+ H+NL       ++N+ D+  V  N T VK++TD+SN H+
Sbjct: 105 NRALIRTSDTIPGQLHLNLEASELLAYYNISDLSSVNCNYTEVKRKTDSSNTHS 158


>AE014134-2024|AAF53064.1|  677|Drosophila melanogaster CG16854-PA
           protein.
          Length = 677

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
 Frame = +3

Query: 369 NRASPRYKGLIHGR-HVNLSV-----FFNVIDIGRVINNITVVKQQTDASNEHT 512
           NRA  R    I G+ H+NL       ++N+ D+  V  N T VK++TD+SN H+
Sbjct: 105 NRALIRTSDTIPGQLHLNLEASELLAYYNISDLSSVNCNYTEVKRKTDSSNTHS 158


>AY118576-1|AAM49945.1|  509|Drosophila melanogaster LD43196p
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 166 PLSANGRQGAPEYCNIVIFIRLIKLLL 86
           P   NGR+ AP Y N+V FI +  L++
Sbjct: 2   PRLVNGREAAPTYSNLVGFIFIFNLIV 28


>AE014296-3360|AAF51595.2|  509|Drosophila melanogaster CG5262-PA
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 166 PLSANGRQGAPEYCNIVIFIRLIKLLL 86
           P   NGR+ AP Y N+V FI +  L++
Sbjct: 2   PRLVNGREAAPTYSNLVGFIFIFNLIV 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,053,076
Number of Sequences: 53049
Number of extensions: 457039
Number of successful extensions: 633
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)