Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30739
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 119 3e-26
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 100 1e-20
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 97 2e-19
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 93 3e-18
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 84 2e-15
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 81 1e-14
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 80 3e-14
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 78 8e-14
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 71 1e-11
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 69 4e-11
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 60 3e-08
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 58 7e-08
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 52 4e-06
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 51 1e-05
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 50 2e-05
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 50 3e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 48 1e-04
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 44 0.001
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 44 0.002
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 43 0.004
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 40 0.025
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 39 0.044
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 39 0.044
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 39 0.059
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.077
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.14
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 37 0.24
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 0.55
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 36 0.55
UniRef50_Q0AXV2 Cluster: ATP-dependent nuclease subunit B; n=1; ... 33 2.2
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 33 2.9
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 2.9
UniRef50_A6CGJ3 Cluster: RNA polymerase, sigma-24 subunit, ECF s... 32 6.7
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 32 6.7
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 31 8.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 119 bits (286), Expect = 3e-26
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 253 D 255
+
Sbjct: 77 E 77
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 395
RERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 78 RERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 100 bits (240), Expect = 1e-20
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 253 D 255
+
Sbjct: 77 E 77
Score = 79.0 bits (186), Expect = 4e-14
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78 RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 97.1 bits (231), Expect = 2e-19
Identities = 41/61 (67%), Positives = 54/61 (88%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 253 D 255
+
Sbjct: 77 E 77
Score = 40.7 bits (91), Expect = 0.015
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGY 407
RERR ++VPE SALE + I VD +T +ML L ++ G++ Q + Y
Sbjct: 78 RERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 92.7 bits (220), Expect = 3e-18
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEE
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEE 131
Query: 253 D 255
+
Sbjct: 132 E 132
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
RERRDNYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 133 RERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 83.8 bits (198), Expect = 2e-15
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEE
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEE 116
Query: 253 D 255
+
Sbjct: 117 E 117
Score = 31.9 bits (69), Expect = 6.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLK 344
RERR +YVPE S+++ D + D D K ML+
Sbjct: 118 RERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 253 DVR 261
+ R
Sbjct: 114 ERR 116
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +3
Query: 258 ERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
ERR +Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 114 ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 79.8 bits (188), Expect = 3e-14
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
IEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEE
Sbjct: 18 IEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEE 76
Query: 253 D 255
+
Sbjct: 77 E 77
Score = 68.9 bits (161), Expect = 5e-11
Identities = 27/48 (56%), Positives = 40/48 (83%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 398
RE RDNYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 78 RENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 78.2 bits (184), Expect = 8e-14
Identities = 33/61 (54%), Positives = 46/61 (75%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
+EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEE
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEE 76
Query: 253 D 255
+
Sbjct: 77 E 77
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1
Query: 76 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEED 255
++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE++
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Score = 67.3 bits (157), Expect = 1e-10
Identities = 28/45 (62%), Positives = 39/45 (86%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
RER+DNYVPE+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 132 RERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 69.3 bits (162), Expect = 4e-11
Identities = 28/46 (60%), Positives = 40/46 (86%)
Frame = +3
Query: 252 GRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
G +++ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 119 GERKKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
Score = 64.9 bits (151), Expect = 8e-10
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + +E
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVARGGERKKET 125
Query: 253 DVRGVTTMSQKCL 291
V V+ + Q+ +
Sbjct: 126 YVPEVSALDQEII 138
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 210
I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 58.4 bits (135), Expect = 7e-08
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 79 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 201
KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIK 59
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 282 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 228
+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 17 VEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +1
Query: 76 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR--HSQVRGISIKLQE 249
EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R SQV S + +
Sbjct: 18 EKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQVSPSSCRRRR 77
Query: 250 ED 255
D
Sbjct: 78 RD 79
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 249 RGRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 368
R R R NYVPE S L+ +I EVD TK+MLK+ F +++
Sbjct: 75 RRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +1
Query: 76 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEED 255
EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ + IK EE+
Sbjct: 18 EKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEE 77
Score = 34.7 bits (76), Expect = 0.95
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLK 344
RER++N +P+ S L+ D +EVD T +M+K
Sbjct: 78 RERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 49.6 bits (113), Expect = 3e-05
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR-----LRHSQVRGISI 237
+E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR R S + I++
Sbjct: 17 VEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQRLSMRQEITM 76
Query: 238 KLQEEDVRGVTTMS 279
+EE +R + S
Sbjct: 77 TDEEEYIRRIEGFS 90
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 198
IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 76 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEE 252
EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L E
Sbjct: 35 EKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSLAAE 93
Query: 253 DV-RGVTTMSQKCLLSNMTSSK 315
+ + + + L NM S+
Sbjct: 94 RISKDIVCQNVGFLQINMLMSE 115
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 103 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 192
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 201
+E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 17 VEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 42.7 bits (96), Expect = 0.004
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 198
+EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 17 LEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 39.9 bits (89), Expect = 0.025
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 210
IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 17 IENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 39.1 bits (87), Expect = 0.044
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 174 CWICHTFNEASQTLASARNLYQTSGRGRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 353
C+I H + +L + RERR ++VPE S ++ +I+VD DT DML L
Sbjct: 65 CFIIHLMRRIQKGPVRGISL-KLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLK 123
Query: 354 FN 359
N
Sbjct: 124 LN 125
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 39.1 bits (87), Expect = 0.044
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 204
++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 17 LKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.7 bits (86), Expect = 0.059
Identities = 15/44 (34%), Positives = 31/44 (70%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 204
+E + ++ DF NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 12 LETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 38.3 bits (85), Expect = 0.077
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 198
+E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 16 MERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.14
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -3
Query: 191 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRTRP 27
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFTYVGLTVP 71
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 36.7 bits (81), Expect = 0.24
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 198
+ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 17 LRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 0.55
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 79 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 192
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.5 bits (78), Expect = 0.55
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 189
+E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 16 LEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q0AXV2 Cluster: ATP-dependent nuclease subunit B; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent nuclease subunit B - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 1124
Score = 33.5 bits (73), Expect = 2.2
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 180 ICHTFNEASQTLASARNLYQTSGRGRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 359
IC T + + +A +L+Q GR R+ + +AL+ +II+VDP +MLK + N
Sbjct: 226 ICFTLDPDTWDIAEL-DLFQLPGRSF-RQIRAMVRKNALQEEIIQVDPRPAEMLKSPEIN 283
Query: 360 NINGLQLTQP 389
++ P
Sbjct: 284 HLEAELFAYP 293
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/65 (23%), Positives = 36/65 (55%)
Frame = +1
Query: 76 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEED 255
+K+ + + +D NK++ +E + +K ++N+IAG+ T ++ ++ + + EED
Sbjct: 18 DKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVEAQEASEELEED 77
Query: 256 VRGVT 270
+ T
Sbjct: 78 LESET 82
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 103 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 192
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A6CGJ3 Cluster: RNA polymerase, sigma-24 subunit, ECF
subfamily protein; n=1; Planctomyces maris DSM 8797|Rep:
RNA polymerase, sigma-24 subunit, ECF subfamily protein
- Planctomyces maris DSM 8797
Length = 178
Score = 31.9 bits (69), Expect = 6.7
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 222 ARNLYQTSGRGRERRDNYVPEVSA--LEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 386
ARN Y+ R R+RR N+V V A LE DP+ L+ L + IN L L Q
Sbjct: 64 ARNRYRNWARSRKRRRNHVVSVEATTLESVAAPADPEPAPQLQKLR-SAINQLPLKQ 119
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.9 bits (69), Expect = 6.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 204
+ Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 31 LSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 31.5 bits (68), Expect = 8.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 73 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 192
++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 63 LKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,711,861
Number of Sequences: 1657284
Number of extensions: 7363008
Number of successful extensions: 19190
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 18806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19183
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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