Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30739
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   120   3e-29
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    28   0.14 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   3.9  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  120 bits (288), Expect = 3e-29
 Identities = 55/61 (90%), Positives = 59/61 (96%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 76.6 bits (180), Expect = 4e-16
 Identities = 37/49 (75%), Positives = 41/49 (83%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 401
           RERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P   G
Sbjct: 78  RERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPG 125


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 0.14
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 237 QTSGRGRERRDNYVPEVSALEHDIIEVDPDTKDML 341
           +T GRGR R+D+ +  +S    D IE D D  D L
Sbjct: 16  RTQGRGRPRQDHPIYTLSHPGGDGIETDGDIDDTL 50


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 303 DIIEVDPDTKDMLKMLDFNNINGL 374
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,338
Number of Sequences: 2352
Number of extensions: 8296
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)