Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30739
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.                 100   2e-21
M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.                 100   2e-21
BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17 p...   100   2e-21
AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory compon...   100   2e-21
AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA seq...    85   8e-17
AB058778-1|BAB47504.1|  922|Homo sapiens KIAA1875 protein protein.     30   4.3  
AB208884-1|BAD92121.1|  400|Homo sapiens carnitine palmitoyltran...    29   7.6  

>M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory component
           Gs of adenylyl  protein.
          Length = 135

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRL  DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++   VRGISIKLQEE
Sbjct: 17  IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 78  RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122


>AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA
           sequence from clone RP4-753D5 on chromosome 6p12.1-12.3 
           Contains the 3' end of the TFAP2B gene for transcription
           factor AP-2 sium/caltranscription factor AP-2 beta
           (activating enhancer binding protein 2 beta)).
          Length = 135

 Score = 85.4 bits (202), Expect = 8e-17
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYY  L  DF TNK +C+EIAIIP+K L NK AG+ THLM++++   VRGISIKLQEE
Sbjct: 17  IEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEE 76



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 389
           RERRDNYVPE+SAL+ +IIEVDPDTK+MLK+LDF  ++ LQ+TQP
Sbjct: 78  RERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122


>AB058778-1|BAB47504.1|  922|Homo sapiens KIAA1875 protein protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 145 IPTKPLRNKIAGFATHLMRRLRHSQVRGISI--KLQEEDVRGVTTMS 279
           +P  P   ++   A+ L+ R   S   GIS+  +LQ E +RG TTM+
Sbjct: 250 VPIPPTHRRVHSKASQLLARSSLSHYLGISLDLQLQLEQLRGRTTMA 296


>AB208884-1|BAD92121.1|  400|Homo sapiens carnitine
           palmitoyltransferase 1C variant protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = -2

Query: 306 CHVREQTLLGHS----CHASHVLFLKFDRDSSHLRVSETPH 196
           CHV   +L G S    CH S   F++     +H RVS  PH
Sbjct: 329 CHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFRVSWVPH 369


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,260,426
Number of Sequences: 237096
Number of extensions: 1088097
Number of successful extensions: 2209
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2209
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)