Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30739
         (457 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   119   2e-27
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   119   2e-27
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   119   2e-27
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   119   2e-27
AY051435-1|AAK92859.1|  454|Drosophila melanogaster GH10766p pro...    29   3.0  
AE014296-3626|AAF51787.1|  454|Drosophila melanogaster CG7148-PA...    29   3.0  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 395
           RERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 78  RERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 395
           RERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 78  RERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 395
           RERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 78  RERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 73  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 252
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 253 D 255
           +
Sbjct: 77  E 77



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +3

Query: 255 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 395
           RERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 78  RERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AY051435-1|AAK92859.1|  454|Drosophila melanogaster GH10766p
           protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 228 NLYQTSGRGRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNN 362
           +LY+   +  E +  Y+ EV    HD+  +D  T DM+  L   N
Sbjct: 163 HLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMISKLQLGN 207


>AE014296-3626|AAF51787.1|  454|Drosophila melanogaster CG7148-PA
           protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 228 NLYQTSGRGRERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNN 362
           +LY+   +  E +  Y+ EV    HD+  +D  T DM+  L   N
Sbjct: 163 HLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMISKLQLGN 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,158,892
Number of Sequences: 53049
Number of extensions: 332562
Number of successful extensions: 930
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)