BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30738 (702 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 80 2e-15 AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 65 4e-11 AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 65 4e-11 U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 59 3e-09 U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 59 3e-09 AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 59 3e-09 U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 3e-08 L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 3e-08 AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 3e-08 U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 53 2e-07 U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.002 L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.002 L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.002 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.009 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.009 AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 37 0.012 AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 37 0.012 AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 37 0.012 Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 37 0.016 Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 37 0.016 Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.016 U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 37 0.016 U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 37 0.016 Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.021 Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.037 AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 36 0.037 L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.086 L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.086 Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.26 AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 33 0.26 Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 32 0.46 Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.46 U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.80 Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.8 Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 30 1.8 U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.8 Z81536-11|CAB04363.2| 295|Caenorhabditis elegans Hypothetical p... 29 2.4 U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 2.4 U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.4 U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.4 AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 4.3 Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 5.6 AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 28 5.6 AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.6 AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.6 Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 7.4 Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 7.4 Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 9.8 AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 9.8 AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 27 9.8 AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 27 9.8 AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 27 9.8 AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 9.8 >AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical protein K08D12.3a protein. Length = 151 Score = 79.8 bits (188), Expect = 2e-15 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 30/112 (26%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEAD------------RCYRCNGTGHIARDCAQSPDE-------- 126 C+ C TGHF+RDC + CY C G GH +RDC + E Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96 Query: 127 ----------PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 CYNC ++GHI+R C E G + + CY C ++GHISR+CP Sbjct: 97 RGGEGRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCP 147 Score = 73.7 bits (173), Expect = 1e-13 Identities = 45/119 (37%), Positives = 55/119 (46%), Gaps = 36/119 (30%) Frame = +1 Query: 7 CFKCNRTGHFARDCKE-EAD----------RCYRCNGTGHIARDCAQSPDEP-------- 129 C+KC + GH +R+C E+D CY C TGH +RDC + Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65 Query: 130 --SCYNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPE 255 SCYNC GH +R+CP EGG R Q CYNC +SGHISR C E Sbjct: 66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTE 124 Score = 68.9 bits (161), Expect = 3e-12 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 17/82 (20%) Frame = +1 Query: 58 ADR-CYRCNGTGHIARDCAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 204 +DR CY+C GHI+R+C + +CYNC +TGH +R+CP+GG + Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61 Query: 205 ------TCYNCNKSGHISRNCP 252 +CYNC GH SR+CP Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83 Score = 55.6 bits (128), Expect = 3e-08 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 4/40 (10%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKE----EADRCYRCNGTGHIARDC 108 +KC+ C R+GH +R+C E E RCY+C TGHI+RDC Sbjct: 107 QKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146 Score = 31.5 bits (68), Expect = 0.60 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 249 SRGTKTCYVCGKPGHISREYDDARN*PQPPC 341 S G + CY CG+ GHISRE ++ + + C Sbjct: 103 SFGGQKCYNCGRSGHISRECTESGSAEEKRC 133 Score = 31.1 bits (67), Expect = 0.80 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEAD 63 ++C++C TGH +RDC + + Sbjct: 131 KRCYQCQETGHISRDCPSQTN 151 Score = 27.5 bits (58), Expect = 9.8 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +3 Query: 261 KTCYVCGKPGHISR 302 + CY C +PGHISR Sbjct: 4 RNCYKCQQPGHISR 17 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 Query: 255 GTKTCYVCGKPGHISREYDDARN 323 G +CY CG GH SR+ AR+ Sbjct: 65 GGGSCYNCGGRGHYSRDCPSARS 87 >AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA helicase-4 protein. Length = 1156 Score = 65.3 bits (152), Expect = 4e-11 Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Frame = +1 Query: 7 CFKCNRTGHFARDCKE---EADRCYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARN 171 C C + GHFA DC + C C GH A DC Q P P C NC + GH A++ Sbjct: 595 CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKD 653 Query: 172 CP-EGGRESATQTCYNCNKSGHISRNCP 252 C E R T+ C C + GH CP Sbjct: 654 CQNERVRMEPTEPCRRCAEEGHWGYECP 681 Score = 58.4 bits (135), Expect = 5e-09 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Frame = +1 Query: 7 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARN 171 C C GH +++C K + R C C GH A DC Q P P C NC GH A + Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCGIEGHFAVD 630 Query: 172 CPEGGRESATQTCYNCNKSGHISRNC 249 C + + C NC + GH +++C Sbjct: 631 CDQ--PKVPRGPCRNCGQEGHFAKDC 654 Score = 47.2 bits (107), Expect = 1e-05 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +1 Query: 19 NRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARNCPEGGRE 192 N+ G++ D E C+ C GHI+++C P P C NC + GH A +C + Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612 Query: 193 SATQTCYNCNKSGHISRNCPE 255 C NC GH + +C + Sbjct: 613 VPRGPCRNCGIEGHFAVDCDQ 633 Score = 37.5 bits (83), Expect = 0.009 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADR------CYRCNGTGHIARDCAQSPDE 126 C C + GHFA+DC+ E R C RC GH +C P + Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 267 CYVCGKPGHISREYDDARN*PQPPCLPYNQL 359 C+ CG+ GHIS+E D + P+ PC QL Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601 >AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase protein 4 protein. Length = 1156 Score = 65.3 bits (152), Expect = 4e-11 Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Frame = +1 Query: 7 CFKCNRTGHFARDCKE---EADRCYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARN 171 C C + GHFA DC + C C GH A DC Q P P C NC + GH A++ Sbjct: 595 CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKD 653 Query: 172 CP-EGGRESATQTCYNCNKSGHISRNCP 252 C E R T+ C C + GH CP Sbjct: 654 CQNERVRMEPTEPCRRCAEEGHWGYECP 681 Score = 58.4 bits (135), Expect = 5e-09 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Frame = +1 Query: 7 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARN 171 C C GH +++C K + R C C GH A DC Q P P C NC GH A + Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCGIEGHFAVD 630 Query: 172 CPEGGRESATQTCYNCNKSGHISRNC 249 C + + C NC + GH +++C Sbjct: 631 CDQ--PKVPRGPCRNCGQEGHFAKDC 654 Score = 47.2 bits (107), Expect = 1e-05 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +1 Query: 19 NRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP--SCYNCNKTGHIARNCPEGGRE 192 N+ G++ D E C+ C GHI+++C P P C NC + GH A +C + Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612 Query: 193 SATQTCYNCNKSGHISRNCPE 255 C NC GH + +C + Sbjct: 613 VPRGPCRNCGIEGHFAVDCDQ 633 Score = 37.5 bits (83), Expect = 0.009 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADR------CYRCNGTGHIARDCAQSPDE 126 C C + GHFA+DC+ E R C RC GH +C P + Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 267 CYVCGKPGHISREYDDARN*PQPPCLPYNQL 359 C+ CG+ GHIS+E D + P+ PC QL Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601 >U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. Length = 974 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 54.0 bits (124), Expect = 1e-07 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 15/98 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQS--PDE-----PSCYNCNK 150 CF C + GH + DC KE R CY C GH +RDC + P E S + Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGN 432 Query: 151 TGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPE 255 G EG E C+NC GH S CPE Sbjct: 433 DGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470 Score = 48.4 bits (110), Expect = 5e-06 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPEGGRES 195 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE + Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304 Query: 196 ATQTCYNCNKSG 231 + + SG Sbjct: 305 EGRNGFTGGSSG 316 Score = 48.0 bits (109), Expect = 6e-06 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 15/97 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARDCAQSPDEP--SCYN 141 C+ C + GH +RDC EE NG G A + + C+N Sbjct: 398 CYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFN 457 Query: 142 CNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 C GH + CPE R C+NC + GH S CP Sbjct: 458 CKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 489 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ 114 CF C + GH + DC KE R CY C GH +RDC + Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 454 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494 Score = 31.9 bits (69), Expect = 0.46 Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 22/105 (20%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARDCAQSPDEPS 132 C+ C + GH +RDC EE NG TG + + S Sbjct: 284 CYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGES 343 Query: 133 CYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPE 255 + G + GG R C+NC + GH S +CPE Sbjct: 344 GFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388 Score = 30.7 bits (66), Expect = 1.1 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 187 RESATQTCYNCNKSGHISRNCPE 255 R C+NC + GH S +CPE Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415 >U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2 protein. Length = 974 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 54.0 bits (124), Expect = 1e-07 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 15/98 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQS--PDE-----PSCYNCNK 150 CF C + GH + DC KE R CY C GH +RDC + P E S + Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGN 432 Query: 151 TGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPE 255 G EG E C+NC GH S CPE Sbjct: 433 DGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470 Score = 48.4 bits (110), Expect = 5e-06 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPEGGRES 195 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE + Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304 Query: 196 ATQTCYNCNKSG 231 + + SG Sbjct: 305 EGRNGFTGGSSG 316 Score = 48.0 bits (109), Expect = 6e-06 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 15/97 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARDCAQSPDEP--SCYN 141 C+ C + GH +RDC EE NG G A + + C+N Sbjct: 398 CYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFN 457 Query: 142 CNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 C GH + CPE R C+NC + GH S CP Sbjct: 458 CKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 489 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ 114 CF C + GH + DC KE R CY C GH +RDC + Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 454 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494 Score = 31.9 bits (69), Expect = 0.46 Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 22/105 (20%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARDCAQSPDEPS 132 C+ C + GH +RDC EE NG TG + + S Sbjct: 284 CYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGES 343 Query: 133 CYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPE 255 + G + GG R C+NC + GH S +CPE Sbjct: 344 GFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388 Score = 30.7 bits (66), Expect = 1.1 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 187 RESATQTCYNCNKSGHISRNCPE 255 R C+NC + GH S +CPE Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415 >AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line helicase protein 2 protein. Length = 974 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 58.8 bits (136), Expect = 3e-09 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR+CPE Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 54.0 bits (124), Expect = 1e-07 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 15/98 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQS--PDE-----PSCYNCNK 150 CF C + GH + DC KE R CY C GH +RDC + P E S + Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGN 432 Query: 151 TGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPE 255 G EG E C+NC GH S CPE Sbjct: 433 DGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470 Score = 48.4 bits (110), Expect = 5e-06 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPEGGRES 195 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE + Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304 Query: 196 ATQTCYNCNKSG 231 + + SG Sbjct: 305 EGRNGFTGGSSG 316 Score = 48.0 bits (109), Expect = 6e-06 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +1 Query: 25 TGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 +G +D E + C+ C GH + DC + E CYNC + GH +R+CPE Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 15/97 (15%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARDCAQSPDEP--SCYN 141 C+ C + GH +RDC EE NG G A + + C+N Sbjct: 398 CYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFN 457 Query: 142 CNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 C GH + CPE R C+NC + GH S CP Sbjct: 458 CKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 489 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ 114 CF C + GH + DC KE R CY C GH +RDC + Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 454 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494 Score = 31.9 bits (69), Expect = 0.46 Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 22/105 (20%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARDCAQSPDEPS 132 C+ C + GH +RDC EE NG TG + + S Sbjct: 284 CYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGES 343 Query: 133 CYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPE 255 + G + GG R C+NC + GH S +CPE Sbjct: 344 GFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388 Score = 30.7 bits (66), Expect = 1.1 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 187 RESATQTCYNCNKSGHISRNCPE 255 R C+NC + GH S +CPE Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SR+ + R Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415 >U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 55.6 bits (128), Expect = 3e-08 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR C E Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 51.2 bits (117), Expect = 7e-07 Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 17/100 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ--SPDEPSC---------- 135 CF C + GH + DC KE R CY C GH +R+C + P E Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFG 219 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 N G GG E C+NC GH S CPE Sbjct: 220 NNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259 Score = 44.4 bits (100), Expect = 8e-05 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 17/99 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEAD-RCYRCNGTGHIAR----------------DCAQSPDEPSC 135 C+ C + GH +R+C EE R R G G A + C Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 +NC GH + CPE R C+NC + GH S CP Sbjct: 245 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 278 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 52 EEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 E + C+ C GH + DC + E CYNC + GH +R C E Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 243 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283 Score = 31.5 bits (68), Expect = 0.60 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SRE + R Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 181 GGRESATQTCYNCNKSGHISRNCPE 255 GG E C+NC + GH S +CPE Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPE 175 >L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 55.6 bits (128), Expect = 3e-08 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR C E Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 51.2 bits (117), Expect = 7e-07 Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 17/100 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ--SPDEPSC---------- 135 CF C + GH + DC KE R CY C GH +R+C + P E Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFG 219 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 N G GG E C+NC GH S CPE Sbjct: 220 NNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259 Score = 44.4 bits (100), Expect = 8e-05 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 17/99 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEAD-RCYRCNGTGHIAR----------------DCAQSPDEPSC 135 C+ C + GH +R+C EE R R G G A + C Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 +NC GH + CPE R C+NC + GH S CP Sbjct: 245 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 278 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 52 EEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 E + C+ C GH + DC + E CYNC + GH +R C E Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 243 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283 Score = 31.5 bits (68), Expect = 0.60 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SRE + R Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 181 GGRESATQTCYNCNKSGHISRNCPE 255 GG E C+NC + GH S +CPE Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPE 175 >AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase protein 1 protein. Length = 763 Score = 55.6 bits (128), Expect = 3e-08 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 +C+NC + GH + +CPE +E + CYNC + GH SR C E Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 51.2 bits (117), Expect = 7e-07 Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 17/100 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARDCAQ--SPDEPSC---------- 135 CF C + GH + DC KE R CY C GH +R+C + P E Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFG 219 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 N G GG E C+NC GH S CPE Sbjct: 220 NNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259 Score = 44.4 bits (100), Expect = 8e-05 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 17/99 (17%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEAD-RCYRCNGTGHIAR----------------DCAQSPDEPSC 135 C+ C + GH +R+C EE R R G G A + C Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244 Query: 136 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 252 +NC GH + CPE R C+NC + GH S CP Sbjct: 245 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECP 278 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 52 EEADRCYRCNGTGHIARDCAQSPDEPS---CYNCNKTGHIARNCPE 180 E + C+ C GH + DC + E CYNC + GH +R C E Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEP 129 KCF C GH + +C E C+ C GH + +C +P +P Sbjct: 243 KCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283 Score = 31.5 bits (68), Expect = 0.60 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 240 PQLSRGTKTCYVCGKPGHISREYDDAR 320 P+ R + CY C +PGH SRE + R Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 181 GGRESATQTCYNCNKSGHISRNCPE 255 GG E C+NC + GH S +CPE Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPE 175 >U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical protein F07E5.5 protein. Length = 384 Score = 52.8 bits (121), Expect = 2e-07 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADR------CYRCNGTGHIARDCAQS-----PDEPSCYNCNKT 153 CFKC H +CK++ + C+ C GHI+RDC Q+ PD C C Sbjct: 256 CFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGAN 315 Query: 154 GHIARNCPEGGRESA 198 H+ R+CPE + A Sbjct: 316 THLRRDCPELAAQKA 330 Score = 49.6 bits (113), Expect = 2e-06 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Frame = +1 Query: 4 KCFKCNRTGHFAR-DCKEEADRCYRCNGTGHIARDCAQ---SPDEPSCYNCNKTGHIARN 171 K +K T R D K C+ C GH DC + S + C+ C H Sbjct: 209 KRWKTRETRRIGRQDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHE 268 Query: 172 CPEGGRESATQ-TCYNCNKSGHISRNC 249 C + G + TC+ C + GHISR+C Sbjct: 269 CKKKGVKGFPYATCFVCKQVGHISRDC 295 >U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env protein precursor protein. Length = 2272 Score = 39.5 bits (88), Expect = 0.002 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 58 ADRCYRCNGTG-HIARDCAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 228 +DRC C G H+ +S D S C C ++G +C + + C+ CN+ Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683 Query: 229 GHISRNCPE 255 GHI+ NCP+ Sbjct: 684 GHIAWNCPK 692 Score = 39.5 bits (88), Expect = 0.002 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 1 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIA 165 ++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687 Query: 166 RNCPE 180 NCP+ Sbjct: 688 WNCPK 692 Score = 38.3 bits (85), Expect = 0.005 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARDCAQSPDEPS 132 +KC +C ++G C + +R C+RCN GHIA +C + + S Sbjct: 654 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698 >L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1 protein, isoforma protein. Length = 2175 Score = 39.5 bits (88), Expect = 0.002 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 58 ADRCYRCNGTG-HIARDCAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 228 +DRC C G H+ +S D S C C ++G +C + + C+ CN+ Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586 Query: 229 GHISRNCPE 255 GHI+ NCP+ Sbjct: 587 GHIAWNCPK 595 Score = 39.5 bits (88), Expect = 0.002 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 1 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIA 165 ++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590 Query: 166 RNCPE 180 NCP+ Sbjct: 591 WNCPK 595 Score = 38.3 bits (85), Expect = 0.005 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARDCAQSPDEPS 132 +KC +C ++G C + +R C+RCN GHIA +C + + S Sbjct: 557 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601 >L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1 protein, isoformb protein. Length = 2186 Score = 39.5 bits (88), Expect = 0.002 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 58 ADRCYRCNGTG-HIARDCAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 228 +DRC C G H+ +S D S C C ++G +C + + C+ CN+ Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597 Query: 229 GHISRNCPE 255 GHI+ NCP+ Sbjct: 598 GHIAWNCPK 606 Score = 39.5 bits (88), Expect = 0.002 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 1 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIA 165 ++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601 Query: 166 RNCPE 180 NCP+ Sbjct: 602 WNCPK 606 Score = 38.3 bits (85), Expect = 0.005 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARDCAQSPDEPS 132 +KC +C ++G C + +R C+RCN GHIA +C + + S Sbjct: 568 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 37.5 bits (83), Expect = 0.009 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 133 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 249 C NC H + CP+ + C NC GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 Score = 34.7 bits (76), Expect = 0.065 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = +1 Query: 28 GHFARDCKEEADRCYRCNGTGHIARDCAQSPD---EPSCYNCNKTGHIARNC--PEG 183 G F + RC C H + +C +P+ + C NC GHI+++C P+G Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 37.5 bits (83), Expect = 0.009 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 133 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 249 C NC H + CP+ + C NC GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 Score = 34.7 bits (76), Expect = 0.065 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = +1 Query: 28 GHFARDCKEEADRCYRCNGTGHIARDCAQSPD---EPSCYNCNKTGHIARNC--PEG 183 G F + RC C H + +C +P+ + C NC GHI+++C P+G Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473 >AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA helicase-3 protein. Length = 720 Score = 37.1 bits (82), Expect = 0.012 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCA 111 CF C + GH A +C C C H A +CA Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238 Score = 33.9 bits (74), Expect = 0.11 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 249 +C+NC K GH A C RE C NC H + C Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANEC 237 Score = 32.7 bits (71), Expect = 0.26 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +1 Query: 58 ADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 213 ++ C+ C GH A +C S + C NC H A C + G + T+ Y Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253 >AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical protein K02F6.1 protein. Length = 783 Score = 37.1 bits (82), Expect = 0.012 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = +1 Query: 67 CYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 231 CY+C GH+++DC QS N KT H N E G T N G Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366 Score = 32.3 bits (70), Expect = 0.35 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 127 PSCYNCNKTGHIARNCPEGGRES 195 P CY C GH++++CP+ S Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333 Score = 29.5 bits (63), Expect = 2.4 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +1 Query: 208 CYNCNKSGHISRNCPE 255 CY C GH+S++CP+ Sbjct: 313 CYKCKVVGHVSKDCPQ 328 >AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase protein 3 protein. Length = 720 Score = 37.1 bits (82), Expect = 0.012 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCA 111 CF C + GH A +C C C H A +CA Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238 Score = 33.9 bits (74), Expect = 0.11 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 249 +C+NC K GH A C RE C NC H + C Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANEC 237 Score = 32.7 bits (71), Expect = 0.26 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +1 Query: 58 ADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 213 ++ C+ C GH A +C S + C NC H A C + G + T+ Y Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253 >Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical protein F02E9.2b protein. Length = 196 Score = 36.7 bits (81), Expect = 0.016 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 133 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 C+ C K H A++CP ++ + CY C H+S CPE Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152 Score = 35.5 bits (78), Expect = 0.037 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 64 RCYRCNGTG-HIARDCAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 192 RC+RC H A+ C D CY C H++ CPE R+ Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156 Score = 31.1 bits (67), Expect = 0.80 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 4 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARDCAQ 114 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152 >Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical protein F02E9.2a protein. Length = 227 Score = 36.7 bits (81), Expect = 0.016 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 133 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 C+ C K H A++CP ++ + CY C H+S CPE Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183 Score = 35.5 bits (78), Expect = 0.037 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 64 RCYRCNGTG-HIARDCAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 192 RC+RC H A+ C D CY C H++ CPE R+ Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187 Score = 31.1 bits (67), Expect = 0.80 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 4 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARDCAQ 114 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical protein F11A10.8 protein. Length = 302 Score = 36.7 bits (81), Expect = 0.016 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = +1 Query: 7 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPS-----CYNCNKTGHIARN 171 C C+ GH A C + R N H D + PD+ + CY C + GH A Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264 Query: 172 CPEGGRESATQTCY 213 C +G + T + Sbjct: 265 CHKGALAFLSNTAH 278 Score = 35.5 bits (78), Expect = 0.037 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = +1 Query: 37 ARDCKEEADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 216 A+ +A C+ C+ GH A C P + N + + + + + TCY Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254 Query: 217 CNKSGHISRNC 249 C + GH + C Sbjct: 255 CGEKGHYANRC 265 Score = 27.9 bits (59), Expect = 7.4 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +1 Query: 205 TCYNCNKSGHISRNCP 252 TC+NC++ GH + CP Sbjct: 205 TCHNCHERGHKATTCP 220 >U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. Length = 227 Score = 36.7 bits (81), Expect = 0.016 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 133 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 C+ C K H A++CP ++ + CY C H+S CPE Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183 Score = 35.5 bits (78), Expect = 0.037 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 64 RCYRCNGTG-HIARDCAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 192 RC+RC H A+ C D CY C H++ CPE R+ Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187 Score = 31.1 bits (67), Expect = 0.80 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 4 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARDCAQ 114 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. Length = 227 Score = 36.7 bits (81), Expect = 0.016 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 133 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 C+ C K H A++CP ++ + CY C H+S CPE Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183 Score = 35.5 bits (78), Expect = 0.037 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 64 RCYRCNGTG-HIARDCAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 192 RC+RC H A+ C D CY C H++ CPE R+ Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187 Score = 31.1 bits (67), Expect = 0.80 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 4 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARDCAQ 114 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical protein M02G9.3 protein. Length = 294 Score = 36.3 bits (80), Expect = 0.021 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Frame = -3 Query: 259 VPRDSCGRCGRTCCSYSRSASQ-TPAPLRDSSVRC-GPSC---CS--CNMTARPGSVRSR 101 V R CGR +CCS S S S P + C P C CS CN ++ S Sbjct: 30 VRRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSG 89 Query: 100 ALCAQCRYICSNGQPLP 50 C+ C+ CS+ P Sbjct: 90 PSCSSCQSACSSACTTP 106 >Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical protein T23F6.1 protein. Length = 160 Score = 35.5 bits (78), Expect = 0.037 Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Frame = -3 Query: 247 SCGRCGRTCCSYSRSASQTPAPLRDSSVRCG-PSCCSCNMTARPGSVRSRALCAQCRYIC 71 S G CG+TCC P P CG P C C V + C C+ +C Sbjct: 70 SMGMCGQTCC------PSAPPP-----CSCGTPGCMQCVQQTVLVPVTTTTCCKCCQPVC 118 Query: 70 SNGQPLPCNPSQSVLCGCT 14 +N C CGCT Sbjct: 119 TNA----CTNGGGCSCGCT 133 >AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical protein K08D12.3b protein. Length = 42 Score = 35.5 bits (78), Expect = 0.037 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 130 SCYNCNKTGHIARNCPEG 183 +CY C + GHI+RNCP G Sbjct: 5 NCYKCQQPGHISRNCPNG 22 Score = 34.3 bits (75), Expect = 0.086 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +1 Query: 202 QTCYNCNKSGHISRNCP 252 + CY C + GHISRNCP Sbjct: 4 RNCYKCQQPGHISRNCP 20 Score = 29.1 bits (62), Expect = 3.2 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 7 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 96 C+KC + GH +R+C E+D R G G + Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36 Score = 27.9 bits (59), Expect = 7.4 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%) Frame = +1 Query: 58 ADR-CYRCNGTGHIARDC 108 +DR CY+C GHI+R+C Sbjct: 2 SDRNCYKCQQPGHISRNC 19 Score = 27.5 bits (58), Expect = 9.8 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +3 Query: 261 KTCYVCGKPGHISR 302 + CY C +PGHISR Sbjct: 4 RNCYKCQQPGHISR 17 >L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 10, isoform a protein. Length = 456 Score = 34.3 bits (75), Expect = 0.086 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1 Query: 67 CYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 246 C +C+GT + SC CN TG +++ +GG T TC C SGH ++N Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243 Query: 247 -CPE 255 C E Sbjct: 244 PCQE 247 >L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 10, isoform b protein. Length = 446 Score = 34.3 bits (75), Expect = 0.086 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1 Query: 67 CYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 246 C +C+GT + SC CN TG +++ +GG T TC C SGH ++N Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243 Query: 247 -CPE 255 C E Sbjct: 244 PCQE 247 >Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical protein AC3.4 protein. Length = 425 Score = 32.7 bits (71), Expect = 0.26 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Frame = -3 Query: 247 SCGRCGRTCCSYSRSASQTPAPLRDSSVRCGPSCC-SCNMTA---RPGSVRSRALC-AQC 83 S +C TC S S P + V+C PSC +C + P +V+ C QC Sbjct: 101 SVSQCQSTC-QQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQC 159 Query: 82 RYICSNGQPL-PCNPSQSVLC 23 + C QP+ C P C Sbjct: 160 QQQCVQTQPIQQCQPQCQQQC 180 >AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical protein F54G2.2 protein. Length = 1023 Score = 32.7 bits (71), Expect = 0.26 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Frame = +1 Query: 103 DCAQSPDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCPE 255 D P+ C C + G +C P+ RE C+ C + GHIS CP+ Sbjct: 571 DQVNVPENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625 >Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical protein T23F1.6 protein. Length = 330 Score = 31.9 bits (69), Expect = 0.46 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 5/82 (6%) Frame = -3 Query: 247 SCGRCGRTCCSYSRSASQTPAPLRDSSVRCGPSCCS-CNMTARPGSVRSR----ALCAQC 83 +C +C +C + + + +C P C C + + S+ A C Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290 Query: 82 RYICSNGQPLPCNPSQSVLCGC 17 C+ + C P Q+ CGC Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312 >Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical protein AC3.3 protein. Length = 425 Score = 31.9 bits (69), Expect = 0.46 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Frame = -3 Query: 247 SCGRCGRTCCSYSRSASQTPAPLRDSSVRCGPSCC-SCNMTA---RPGSVRSRALC-AQC 83 S +C TC S S P + V+C PSC +C + P V+ C QC Sbjct: 101 SVSQCQSTC-QQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQC 159 Query: 82 RYICSNGQPL-PCNPSQSVLC 23 + C QP+ C P C Sbjct: 160 QQQCVQTQPIQQCQPQCQQQC 180 >U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein K10D2.3 protein. Length = 1425 Score = 31.1 bits (67), Expect = 0.80 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +1 Query: 94 IARDCAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 246 + R C Q +P + C+ C++ GH +CP+ + + N + R+ Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRS 1394 Score = 29.9 bits (64), Expect = 1.8 Identities = 19/61 (31%), Positives = 25/61 (40%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPEG 183 +C +C+R GHF C + A AR S S Y N +G +N EG Sbjct: 1356 QCHQCHRIGHFVESCPQRA--------LAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEG 1407 Query: 184 G 186 G Sbjct: 1408 G 1408 Score = 29.5 bits (63), Expect = 2.4 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +1 Query: 160 IARNCPEGGRESATQTCYNCNKSGHISRNCPE 255 + R C +G + Q C+ C++ GH +CP+ Sbjct: 1342 LLRKCNQGSAPTDRQ-CHQCHRIGHFVESCPQ 1372 >Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical protein M195.2 protein. Length = 419 Score = 29.9 bits (64), Expect = 1.8 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 9/81 (11%) Frame = -3 Query: 247 SCGR-CGRTC-------CSYSRSASQTPAPLRDSSVRCGPSCCS-CNMTARPGSVRSRAL 95 SC R C R C S S++ +QTP + + G C S C+ T R S +R Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180 Query: 94 CAQCRYICSNGQPLPCNPSQS 32 + C C N C PSQS Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200 >Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical protein C27B7.5 protein. Length = 386 Score = 29.9 bits (64), Expect = 1.8 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 Query: 208 CYNCNKSGHISRNCPE 255 C++C + GHISR CP+ Sbjct: 170 CFHCQEHGHISRMCPK 185 Score = 28.3 bits (60), Expect = 5.6 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +1 Query: 133 CYNCNKTGHIARNCPE 180 C++C + GHI+R CP+ Sbjct: 170 CFHCQEHGHISRMCPK 185 >U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical protein F35A5.4 protein. Length = 524 Score = 29.9 bits (64), Expect = 1.8 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -3 Query: 238 RCGRTCCSYSRSASQTPAPLRDSSVRCGPSCCSCNMTARPGSVRSRALC-AQCRYICSN 65 RC TC + + P P C PSC P V+ +LC QCR +C+N Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSMCMPSC-------SPSCVQQYSLCPQQCRPMCTN 291 >Z81536-11|CAB04363.2| 295|Caenorhabditis elegans Hypothetical protein F40D4.7 protein. Length = 295 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 552 CVLNHLNNRD*TIDGVALQFLALQSIYLIYFVQIFLS 662 C N N D T++ VA LAL + +I+F + LS Sbjct: 198 CKANKTKNNDATMNRVAANRLALIDVIIIFFFDVLLS 234 >U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 3 protein. Length = 242 Score = 29.5 bits (63), Expect = 2.4 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 8/84 (9%) Frame = -3 Query: 244 CGRCGRTCCSYSRSASQTPAPLRDS---SVRCGPSC---CSCNMTARPGSVRSRA-LCAQ 86 C +C C + + +A Q L S S +C P C C + S++ A C + Sbjct: 143 CQQCQSACQAPATAAPQISLNLEASVSQSAQCEPQCQQSCQQQCVQQQQSMQQCASACTK 202 Query: 85 -CRYICSNGQPLPCNPSQSVLCGC 17 C CS +PC C C Sbjct: 203 SCSQSCSQPAQMPCQTQTLNSCSC 226 >U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein C16A3.7 protein. Length = 1119 Score = 29.5 bits (63), Expect = 2.4 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Frame = -3 Query: 220 CSYSRSASQTPAPLRDSSVRCGPSCCS-CNMTARPGSVRSRALCAQCRYICSNGQPLPCN 44 C R+ Q+ R P+C S C+ G+ CR C G PCN Sbjct: 466 CPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCGTPGKNH---HCREKCHEGPCPPCN 522 Query: 43 PSQSVLCGC 17 + SV+C C Sbjct: 523 LNTSVICRC 531 >U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical protein C28H8.9a protein. Length = 372 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 52 EEADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGH 159 E + C C+GT + ++ D SC++C ++GH Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287 >AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical protein Y51H4A.26 protein. Length = 107 Score = 28.7 bits (61), Expect = 4.3 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Frame = +1 Query: 37 ARDCKEEAD-RCYRCNGTGHIARDCAQSPDEPSCYNCNKTGH----IARNCPE 180 A+ C+ D + Y+ GH R C D P Y C K G I +NCP+ Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89 >Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical protein F36F2.3b protein. Length = 363 Score = 28.3 bits (60), Expect = 5.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 184 GRESATQTCYNCNKSGHISRNCP 252 G T TC C++ GH +NCP Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172 >Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein F36F2.3a protein. Length = 1128 Score = 28.3 bits (60), Expect = 5.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 184 GRESATQTCYNCNKSGHISRNCP 252 G T TC C++ GH +NCP Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172 >Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein K08C7.3b protein. Length = 3672 Score = 28.3 bits (60), Expect = 5.6 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = +1 Query: 1 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARDCAQSPDEPSCYNC--NKTGHIAR 168 ++C +C +G F E C +CNG ++ + P+ CY C N G Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971 Query: 169 NCPEG--GRESATQTCYNCNKSGHISRNC 249 +C G + C +C S S+ C Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000 >Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein K08C7.3a protein. Length = 3704 Score = 28.3 bits (60), Expect = 5.6 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = +1 Query: 1 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARDCAQSPDEPSCYNC--NKTGHIAR 168 ++C +C +G F E C +CNG ++ + P+ CY C N G Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971 Query: 169 NCPEG--GRESATQTCYNCNKSGHISRNC 249 +C G + C +C S S+ C Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000 >AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical protein F49F1.8 protein. Length = 615 Score = 28.3 bits (60), Expect = 5.6 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 Query: 4 KCFKCNRTGHFARDCKEEA 60 +C C GH AR+CK++A Sbjct: 575 QCHYCKNVGHMARNCKKKA 593 >AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha chain protein. Length = 3704 Score = 28.3 bits (60), Expect = 5.6 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = +1 Query: 1 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARDCAQSPDEPSCYNC--NKTGHIAR 168 ++C +C +G F E C +CNG ++ + P+ CY C N G Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971 Query: 169 NCPEG--GRESATQTCYNCNKSGHISRNC 249 +C G + C +C S S+ C Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000 >AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha protein. Length = 3704 Score = 28.3 bits (60), Expect = 5.6 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = +1 Query: 1 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARDCAQSPDEPSCYNC--NKTGHIAR 168 ++C +C +G F E C +CNG ++ + P+ CY C N G Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971 Query: 169 NCPEG--GRESATQTCYNCNKSGHISRNC 249 +C G + C +C S S+ C Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000 >Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein F45B8.3 protein. Length = 241 Score = 27.9 bits (59), Expect = 7.4 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -3 Query: 103 RALCAQCRYICSNGQPLPCNPSQSVLCGC 17 R++C +C C N P P NP ++ C Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNC 70 >Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical protein F09B12.1a protein. Length = 573 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 223 CCSYSRSASQTPAPLRDSSVRCGPSCCSCNMTARPGSVRSRALCAQ 86 C S+ + Q AP + + C P CC C+ A+PG + A A+ Sbjct: 17 CFPTSQRSYQYGAPTQQFAA-CTPQCCGCSQ-AQPGPQPAAAAAAR 60 >Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein T12D8.1 protein. Length = 2561 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPE 180 E C NR+G + D + D C + + D C C K+ H+ +C Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112 Query: 181 GGRESATQ-TCYNCNK 225 S C +C + Sbjct: 113 SDVSSLNNFVCISCRR 128 >Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein T12D8.1 protein. Length = 2561 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Frame = +1 Query: 1 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARDCAQSPDEPSCYNCNKTGHIARNCPE 180 E C NR+G + D + D C + + D C C K+ H+ +C Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112 Query: 181 GGRESATQ-TCYNCNK 225 S C +C + Sbjct: 113 SDVSSLNNFVCISCRR 128 >Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical protein ZK1067.7 protein. Length = 373 Score = 27.5 bits (58), Expect = 9.8 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = -3 Query: 220 CSYSRSASQTPAPL-RDSSVRCGPSCCSCNMTARPGSVRSRALCAQCRYICSNG-QPLPC 47 CS S +++Q P + C SC + +A P + + +QC+ CSN C Sbjct: 233 CSSSCTSNQAPIVIVAQQGDSCSNSCSNQCQSACPTPICVQQCNSQCQSQCSNSCSGNSC 292 Query: 46 NPSQSVL 26 N Q ++ Sbjct: 293 NQQQVIV 299 >AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich repeats, ras-likedomain, kinase protein 1 protein. Length = 2395 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = +2 Query: 341 SPLQSTMYIIMPRTDDKQRTPRATHDNRLQYRCRAASAPQTEE*GSTV--DLYIDGSREA 514 SPL + + P T + P+ + Q+R R+ SA +++ S ID +E Sbjct: 786 SPLHVVCHAVPPTTSNGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQKEE 845 Query: 515 RSCLF-LHDVSE 547 SC+ HD E Sbjct: 846 ESCVHKRHDSLE 857 >AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 54 protein. Length = 388 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Frame = -3 Query: 238 RCGRTCCS-YSRSASQTPAPLRDSSVRCGPSCCS-CNMTARPGSVRSRALCAQCRYIC 71 +C C Y+ A+ TPAP+ C C S C +P S QC C Sbjct: 109 QCQSQCAPMYNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQPQCQQQCNVAC 166 >AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine receptor, class h protein82 protein. Length = 360 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 587 Y*WSSVTVFSITEYIFNIFCTDFFVKR*IGCWRTMSLN 700 Y + S+TVFSI YIF +C F +G +R N Sbjct: 30 YTFHSITVFSIPFYIFGGYCILFKSTSQMGSYRLPLFN 67 >AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical protein Y46H3D.6 protein. Length = 345 Score = 27.5 bits (58), Expect = 9.8 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -3 Query: 229 RTCCSYSRSASQTPAPLRDSSVRCGPSCCSCNMTARPGSVRSRALCAQCRY 77 R C ++ R PL SS RC SC N R LCA+CRY Sbjct: 28 RACAAFFRRKVAAGKPL--SSSRCSGSCKLENQVLR-------RLCAKCRY 69 >AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related kinase protein. Length = 2393 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = +2 Query: 341 SPLQSTMYIIMPRTDDKQRTPRATHDNRLQYRCRAASAPQTEE*GSTV--DLYIDGSREA 514 SPL + + P T + P+ + Q+R R+ SA +++ S ID +E Sbjct: 784 SPLHVVCHAVPPTTSNGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQKEE 843 Query: 515 RSCLF-LHDVSE 547 SC+ HD E Sbjct: 844 ESCVHKRHDSLE 855 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,429,300 Number of Sequences: 27780 Number of extensions: 328669 Number of successful extensions: 1541 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 1127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1438 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1624019012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -