Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30736
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 134 8e-32
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 32 0.36
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 32 0.36
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 31 0.84
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 30 1.9
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 3.4
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 3.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 5.9
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 134 bits (323), Expect = 8e-32
Identities = 58/89 (65%), Positives = 76/89 (85%)
Frame = +2
Query: 2 EDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPA 181
EDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+LAARA+ A+ENPA
Sbjct: 13 EDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPA 72
Query: 182 DVFVISSRPFGQRAVLKFAAHTGASLLRG 268
DV V+S+RP+ QRA+LKFAAHTGA+ + G
Sbjct: 73 DVVVVSARPYAQRALLKFAAHTGATAIFG 101
Score = 128 bits (309), Expect = 4e-30
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = +1
Query: 259 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD 438
I GRF+PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +D
Sbjct: 99 IFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLID 158
Query: 439 IAIPCNTKSSHSIGLMWWLLARE 507
I +PCN K SIGLMWW+LARE
Sbjct: 159 IGVPCNNKGERSIGLMWWMLARE 181
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 549 DVVVDLFFYRDPEESEKDEQQA 614
+++ DL+FYRDP E+EK+E A
Sbjct: 201 EIMPDLYFYRDPTETEKEETGA 222
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 145 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR 249
GC CC + C R T R+ CCT C R
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCR 116
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 145 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR 249
GC CC C R T R+ CCT C R
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 145 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR 249
GC CC C R T R+ CCT C R
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 115
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 145 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR 249
GC CC C R T R+ CCT C R
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 116
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 145 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR 249
GC CC C R T R+ CCT C R
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 457 TKSSHSIGLMWWLLAREG*GFVLCFPV 537
T++ HSIG WW++ G FV C+P+
Sbjct: 97 TRTVHSIGTCWWIILFIG-VFVFCWPI 122
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Frame = +1
Query: 457 TKSSHSIGLMWWLLAREG*GFVLC-----FPVT 540
T+ H IG+MWWL A F C FP+T
Sbjct: 72 TRVEHKIGIMWWLCATLSFCFFFCCYLLFFPIT 104
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 424
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 424
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 424
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 424
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 378 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 485
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Frame = +1
Query: 25 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR--- 192
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 193 ---HLITALRSACCTEVCRAHRC*PIAGRFTPGAFTNQI 300
HL + C C H G++ N I
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQGKWNKAQIINNI 551
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Frame = +1
Query: 25 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR--- 192
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 193 ---HLITALRSACCTEVCRAHRC*PIAGRFTPGAFTNQI 300
HL + C C H G++ N I
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQGKWNKAQIINNI 551
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Frame = +1
Query: 25 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR--- 192
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 193 ---HLITALRSACCTEVCRAHRC*PIAGRFTPGAFTNQI 300
HL + C C H G++ N I
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQGKWNKAQIINNI 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,539
Number of Sequences: 27780
Number of extensions: 421423
Number of successful extensions: 1108
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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