Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30735X
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    32   0.003
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.4  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 312 IVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFT 410
           +VTDW N E+I+ Y  +K +LS F    PV+ T
Sbjct: 158 VVTDWVNFERIY-YKLTKKKLSVFFGNKPVILT 189


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 442 KSPPNYSLRH 471
           K PPNY +RH
Sbjct: 406 KLPPNYEIRH 415


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -2

Query: 201 TTNIVWETTFRYLIISEACXXXXXXXXXYDGLIHYNMTQLH 79
           T  I WE   R L  SE            D + H N+T +H
Sbjct: 442 TPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIH 482


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 414 APLNPRRXREKSAELFFETFNVPAL 488
           A    R    KSA  FFET+N   L
Sbjct: 114 ADATKRATMAKSALEFFETYNFDGL 138


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 198 TNIVWETTFRYLIISEAC 145
           T+I+W+TT  +   + AC
Sbjct: 80  TDIIWKTTVAWYAGNVAC 97


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 145 TSFADDQIPKCRFPNYIGRPKH 210
           TSF+D  IPK +   +   PK+
Sbjct: 477 TSFSDSSIPKVKKMEWPQVPKN 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,857
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)