Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30733
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.4  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 302 SAPLTTVWLPSPYNKW 349
           SA + TVW+ S  N+W
Sbjct: 448 SAYVATVWINSVINRW 463


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 223 LTGRLNKCGVIHLV 264
           L  RLN  GVIHLV
Sbjct: 421 LLKRLNGRGVIHLV 434


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 HRQTKQVWCHSPRFDVPIND 284
           +RQ +Q W +S R  +  ND
Sbjct: 177 YRQNQQRWQNSIRHSLSFND 196


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -1

Query: 198 VIINDFKLSDVTVLHHHC*KLNDDFGTGPDEDLSFPSLF 82
           V  N  KL   T+ H H   L+ +    PD +   P  F
Sbjct: 91  VTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEKFDPERF 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,095
Number of Sequences: 336
Number of extensions: 1910
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)