Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30732
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g ...    29   3.2  
U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g ...    29   3.2  
AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.     29   3.2  
AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protei...    29   3.2  
AY008141-1|AAG32094.1|  375|Caenorhabditis elegans heterotrimeri...    29   4.2  
AF039715-1|AAB96733.2|  375|Caenorhabditis elegans G protein, su...    29   4.2  
AB003487-1|BAA22402.1|  375|Caenorhabditis elegans G protein alp...    29   4.2  
AB003486-1|BAA22401.1|  375|Caenorhabditis elegans G protein a(s...    29   4.2  
Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine rec...    28   7.4  
AC024090-8|AAF35422.2|  649|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform b protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 498 RLQALNLKNDHLRKRF-DALKYDVKKIEEVVYDLSIRGLLPKGDADHGPEHEH 653
           R Q +  KN   R++F  +L+    ++EE     S R + P+   +H  E+EH
Sbjct: 173 RSQRMYRKNPKYRRQFGSSLQLSESRLEESTSQESERAVTPESWMEHNNENEH 225


>U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform a protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 498 RLQALNLKNDHLRKRF-DALKYDVKKIEEVVYDLSIRGLLPKGDADHGPEHEH 653
           R Q +  KN   R++F  +L+    ++EE     S R + P+   +H  E+EH
Sbjct: 210 RSQRMYRKNPKYRRQFGSSLQLSESRLEESTSQESERAVTPESWMEHNNENEH 262


>AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 498 RLQALNLKNDHLRKRF-DALKYDVKKIEEVVYDLSIRGLLPKGDADHGPEHEH 653
           R Q +  KN   R++F  +L+    ++EE     S R + P+   +H  E+EH
Sbjct: 210 RSQRMYRKNPKYRRQFGSSLQLSESRLEESTSQESERAVTPESWMEHNNENEH 262


>AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protein
           protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 498 RLQALNLKNDHLRKRF-DALKYDVKKIEEVVYDLSIRGLLPKGDADHGPEHEH 653
           R Q +  KN   R++F  +L+    ++EE     S R + P+   +H  E+EH
Sbjct: 173 RSQRMYRKNPKYRRQFGSSLQLSESRLEESTSQESERAVTPESWMEHNNENEH 225


>AY008141-1|AAG32094.1|  375|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 208 LLQVSGSLEIHDPTLLYLIALTIWLEKGILASHETMAE 321
           +L+++   E + P+  Y   LT W +KG++A +E  +E
Sbjct: 112 ILRITNDPEDNYPSEFYDHILTCWKDKGVMACYERSSE 149


>AF039715-1|AAB96733.2|  375|Caenorhabditis elegans G protein,
           subunit alpha protein 1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 208 LLQVSGSLEIHDPTLLYLIALTIWLEKGILASHETMAE 321
           +L+++   E + P+  Y   LT W +KG++A +E  +E
Sbjct: 112 ILRITNDPEDNYPSEFYDHILTCWKDKGVMACYERSSE 149


>AB003487-1|BAA22402.1|  375|Caenorhabditis elegans G protein alpha
           subunit protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 208 LLQVSGSLEIHDPTLLYLIALTIWLEKGILASHETMAE 321
           +L+++   E + P+  Y   LT W +KG++A +E  +E
Sbjct: 112 ILRITNDPEDNYPSEFYDHILTCWKDKGVMACYERSSE 149


>AB003486-1|BAA22401.1|  375|Caenorhabditis elegans G protein a(s)
           subunit protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 208 LLQVSGSLEIHDPTLLYLIALTIWLEKGILASHETMAE 321
           +L+++   E + P+  Y   LT W +KG++A +E  +E
Sbjct: 112 ILRITNDPEDNYPSEFYDHILTCWKDKGVMACYERSSE 149


>Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical
           protein ZK1307.6 protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +3

Query: 369 H*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTERRLQALNLKNDHLRKRFD 548
           H   S  +  D  +  SSG     P    A  +D +    +E  L+AL L+N+ L+ R D
Sbjct: 147 HHSSSSSSYHDYYQGTSSGSGNTSPTAQAACMDDTR---SSEAVLRAL-LRNEMLKDRID 202

Query: 549 ALKYDVKKIEEVVYDLSI 602
            +K  V+  EEV+   S+
Sbjct: 203 DVKTQVQTSEEVIATFSL 220


>U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein97 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 188 DAVPPTDYFKYQDHWRFMTQRYFI 259
           D  PP   F +Q  W F+T R F+
Sbjct: 102 DCTPPVSLFNFQFSWAFITIRDFV 125


>AC024090-8|AAF35422.2|  649|Caenorhabditis elegans Hypothetical
           protein C52E2.8 protein.
          Length = 649

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 483 DGTERRLQALNLKNDHLRKRFDALKYDVKKIEEVVYDLSIRGL 611
           D  E+R +  N K D  ++ +D +K D+  I  +VYD+  RGL
Sbjct: 322 DEIEKRFR--NAKID--QENYDQMKLDIGIITSLVYDMKNRGL 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,026,422
Number of Sequences: 27780
Number of extensions: 336900
Number of successful extensions: 1045
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)