Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30730
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 587 YGPEKRVSIP 616
           YGPEK  SIP
Sbjct: 203 YGPEKSASIP 212


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 687 CIFNNKYMVIGVLITHR 637
           CIF  KY  I +L+T +
Sbjct: 167 CIFRGKYRNINLLLTEQ 183


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 111 YQKTESVIKTTAEKTSSIIGGITAG 185
           + KTE  +  T +KT+S+   +  G
Sbjct: 316 HNKTEIFLNITGDKTNSVFEHVKLG 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,502
Number of Sequences: 336
Number of extensions: 3701
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)