Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30730
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical pr...    61   9e-10
Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81076-2|CAB03051.3|  333|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical
           protein F13E6.1 protein.
          Length = 195

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 30/89 (33%), Positives = 52/89 (58%)
 Frame = +3

Query: 9   RQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGV 188
           + +++LKRKLG+T + E+++D+N+ LK V ++  YQKT  V   T++            V
Sbjct: 87  KHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQKTAEVAAATSDT-----------V 135

Query: 189 SSKLGQMRNSESFRSIEERVGSLMKTSRV 275
             K   MRNS  F+S E ++GS +  +++
Sbjct: 136 KEKWNDMRNSSLFKSFESKLGSALNNAKM 164


>Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical
           protein F15H10.6 protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +3

Query: 102 SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSLMKTS 269
           ++  +K E V KT  EKT S+IG     +   +G++R    +  +EE +   ++TS
Sbjct: 126 AKAMEKLEHV-KTPMEKTKSLIGKFFNEMWKDVGKLREEVKYDHLEELLEQTLRTS 180


>Z81076-2|CAB03051.3|  333|Caenorhabditis elegans Hypothetical
           protein F35C5.2 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +1

Query: 466 NSTHTKRNTFGLKV*YQAIKSKKKSETFIITQLTVVDDMNIWAG 597
           N  H+KR  F ++  YQ  ++   SE+  +  +  +  + I+AG
Sbjct: 215 NKMHSKRTRFDVEFQYQRSEAMMTSESISVLVIAQISALGIYAG 258


>Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical
           protein K06B4.7 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -2

Query: 717 HCRIIPLNNFCIFNNKYMVIGVLITHRQLILNQKGMDTLFSGPYIHIVHDGKLCNNKRFA 538
           H +I P    C F  K +++G+ +      +   G  + +S  Y  ++ D K  N+K ++
Sbjct: 48  HFKIFPKCRACRFQ-KCLIVGMTLAPLNDGIVSIGNQSDYS--YAKLLDDLKFKNDKNYS 104

Query: 537 FFFGFYGL 514
            F  FY L
Sbjct: 105 HFVNFYSL 112


>AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical
           protein Y39E4B.2 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   RQSSDLKRKLGITVWKEITEDVNQGLKNVKES 104
           ++ S LK KLGIT W ++ + + +  K +K S
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,747,233
Number of Sequences: 27780
Number of extensions: 334918
Number of successful extensions: 1062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)