BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30729 (547 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 64 5e-11 04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 64 7e-11 07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 41 7e-04 07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 35 0.049 07_01_0478 - 3605306-3605614,3605766-3605906 29 1.8 03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 29 3.2 02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 29 3.2 12_01_1057 - 10899871-10899961,10900255-10900411,10901420-109014... 28 4.2 03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 28 4.2 11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 27 7.4 10_02_0086 - 5112095-5112185,5112487-5112599,5113325-5113431,511... 27 9.8 >02_04_0116 + 19901546-19901737,19901825-19901899,19902034-19902115, 19902219-19902298,19903279-19903482,19903625-19903750, 19903872-19903985,19904802-19904918 Length = 329 Score = 64.5 bits (150), Expect = 5e-11 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 1/49 (2%) Frame = +3 Query: 78 ARGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 221 A GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF Sbjct: 278 AIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326 Score = 29.5 bits (63), Expect = 1.8 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 1 ETGIPFRGLFIIDDKQNLRQITINDLPV 84 + GI RGLFIID + ++ TIN+L + Sbjct: 252 DQGIALRGLFIIDKEGVIQHSTINNLAI 279 >04_03_0889 + 20568984-20569037,20569271-20569345,20569981-20570088, 20572066-20572179,20572393-20572509 Length = 155 Score = 64.1 bits (149), Expect = 7e-11 Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 1/49 (2%) Frame = +3 Query: 78 ARGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKAAQEYF 221 A GRSV+ETLR +QA Q+ ++ EVCPA W+PG K++KPD K ++EYF Sbjct: 104 AIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKDSKEYF 152 Score = 29.1 bits (62), Expect = 2.4 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 7 GIPFRGLFIIDDKQNLRQITINDLPV 84 GI RGLFIID + ++ TIN+L + Sbjct: 80 GIALRGLFIIDKEGVIQHSTINNLAI 105 >07_03_1427 + 26495072-26495148,26495323-26495468,26495581-26495729, 26495829-26496224 Length = 255 Score = 40.7 bits (91), Expect = 7e-04 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 Query: 84 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 194 GR+++E +R V A Q KH P NW+PG + + P Sbjct: 185 GRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221 >07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 Length = 220 Score = 34.7 bits (76), Expect = 0.049 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +3 Query: 84 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 215 GR++ E LR A +H P NW+PG + + P + +E Sbjct: 150 GRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193 >07_01_0478 - 3605306-3605614,3605766-3605906 Length = 149 Score = 29.5 bits (63), Expect = 1.8 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = +3 Query: 3 DGHSLPRTLHHRR-QAEPQADHDQRPARGRSVEETLRLVQAFQFTDKHGEVCPANWRPGA 179 DGH LPRTL HR QA + + ++ + L+L+ + K P Sbjct: 7 DGHGLPRTLSHRELQAMCKRNDGHANMTNATMTDALQLLPSVDGIHKIDTTALCLPTPSR 66 Query: 180 KTIKPDTKAA 209 T+K KAA Sbjct: 67 LTMKSALKAA 76 >03_05_0554 - 25551220-25551310,25551562-25551695,25552115-25552221, 25552359-25552437,25552524-25552613,25552790-25553044, 25553388-25553537,25553677-25553976 Length = 401 Score = 28.7 bits (61), Expect = 3.2 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -1 Query: 220 KYSWAALVSGLMVLAPGLQ 164 KY W A+ G MVL PGL+ Sbjct: 370 KYRWKAIKGGTMVLGPGLR 388 >02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219, 12925301-12925529,12925614-12926295,12926409-12926682, 12926822-12927347,12927460-12927698,12927799-12927896, 12928017-12928020,12928657-12928832,12929593-12929647, 12930787-12931047 Length = 1239 Score = 28.7 bits (61), Expect = 3.2 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -1 Query: 289 VLFEIVYSIRVMLVWCRV*LVSPK-YSWAALVSGLMVLAPGLQLAGHTSPCLS 134 V+F IV+ + VW L+ K Y+ +++ LM + G G +SPCL+ Sbjct: 237 VMF-IVFCSYGLAVWYGAKLIIEKGYTGGYIINVLMAIMSGAMALGQSSPCLN 288 >12_01_1057 - 10899871-10899961,10900255-10900411,10901420-10901498, 10901618-10901707,10903232-10903486,10903674-10903689, 10903907-10903940,10905653-10905884 Length = 317 Score = 28.3 bits (60), Expect = 4.2 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -1 Query: 220 KYSWAALVSGLMVLAPGLQ 164 KY W + G MVL PGLQ Sbjct: 286 KYRWKVIKGGKMVLCPGLQ 304 >03_05_0379 + 23628200-23628366,23629074-23629133,23630177-23630209, 23630253-23630665,23631522-23632008,23632623-23633334 Length = 623 Score = 28.3 bits (60), Expect = 4.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +3 Query: 27 LHHRRQAEPQADHDQRPARGRSVEETLRLVQAFQFTDKHG 146 +HHR + E DH R R R + ET ++Q Q +K+G Sbjct: 141 IHHRWKMESILDHFDRKGRDRMLRETGVVIQQ-QAEEKNG 179 >11_04_0291 - 15851647-15852252,15853995-15854136,15854666-15854881, 15854957-15855052,15855147-15855259,15856516-15856727, 15856842-15856939,15857066-15857186,15857291-15857508, 15857657-15857837,15857919-15858207,15858303-15858367, 15858480-15858591 Length = 822 Score = 27.5 bits (58), Expect = 7.4 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +3 Query: 84 GRSVEETLRLVQAFQFTDKHGEV--CPAN 164 G S+EE L LV F D HGE+ C +N Sbjct: 559 GGSMEEMLNLVALFDKWDDHGEIGFCSSN 587 >10_02_0086 - 5112095-5112185,5112487-5112599,5113325-5113431, 5113782-5113860,5114000-5114089,5114628-5114882, 5117025-5117174,5117634-5117933 Length = 394 Score = 27.1 bits (57), Expect = 9.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 232 LVSPKYSWAALVSGLMVLAPGLQ 164 L S K SW A+ G M L+PGL+ Sbjct: 359 LPSHKSSWKAIKGGRMALSPGLR 381 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,152,164 Number of Sequences: 37544 Number of extensions: 203407 Number of successful extensions: 590 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 579 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 588 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1222086348 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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