Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30729
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 83 2e-16
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 74 8e-14
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 30 1.2
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 30 1.2
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 28 5.0
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 28 5.0
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 28 5.0
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 28 5.0
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 28 5.0
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 27 6.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 27 6.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 27 6.7
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 27 8.8
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 27 8.8
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +3
Query: 84 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQEYF 221
GRSV+ETLRLVQAFQF +KHGEVCPA W PG+ TIKP K +QEYF
Sbjct: 147 GRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKPGVKESQEYF 192
Score = 50.4 bits (115), Expect = 8e-07
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1
Query: 1 ETGIPFRGLFIIDDKQNLRQITINDLPV 84
+ GI FRGLFIID QNLRQITINDLPV
Sbjct: 119 DEGIAFRGLFIIDPSQNLRQITINDLPV 146
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 73.7 bits (173), Expect = 8e-14
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 84 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQEYFGDTN 233
GRSV+ETLR+++AFQF+DKHGEVCPA+W + TIKP ++EYF N
Sbjct: 176 GRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKPGVATSKEYFNKVN 225
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 1 ETGIPFRGLFIIDDKQNLRQITINDLPV 84
E+G+ +RGLF+ID +R T NDLPV
Sbjct: 148 ESGLSYRGLFLIDPSGTVRHTTCNDLPV 175
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 125 PVHGQARRGVPRQLEARRQDHQARHQGRPGVLRRHQLDTTPHQHH 259
P+H Q ++G PR + +Q H HQ + R+HQ P+ ++
Sbjct: 463 PMHHQMQQGPPRMMYMHQQ-HHPMHQVEDQMQRQHQRMQQPNMNN 506
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 125 PVHGQARRGVPRQLEARRQDHQARHQGRPGVLRRHQLDTTPHQHH 259
P+H Q ++G PR + +Q H HQ + R+HQ P+ ++
Sbjct: 463 PMHHQMQQGPPRMMYMHQQ-HHPMHQVEDQMQRQHQRMQQPNMNN 506
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -1
Query: 520 QLF--IQPLDYIKLINTDLTS 464
QLF IQP+DY++ ++ DLTS
Sbjct: 80 QLFYSIQPMDYVRYVSCDLTS 100
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 84 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 188
GR+ E LR+V Q K PANW G I
Sbjct: 152 GRNFVEILRMVDGVQLGTKAPVATPANWIAGDNVI 186
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 246 GVVSSWCRRSTPGRPWC 196
G+V C R TPG+ WC
Sbjct: 413 GLVPPKCTRETPGKDWC 429
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 15 LPRTLHHRRQAEPQADHDQRPARGRSVEETLRLVQ 119
L R+LH+RR+ E Q + R +EE R+ Q
Sbjct: 436 LNRSLHNRREMEKQKAEEARRKEAERIEEIERMRQ 470
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 15 LPRTLHHRRQAEPQADHDQRPARGRSVEETLRLVQ 119
L R+LH+RR+ E Q + R +EE R+ Q
Sbjct: 436 LNRSLHNRREMEKQKAEEARRKEAERIEEIERMRQ 470
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +2
Query: 149 GVPRQLEARRQDHQAR------HQGRPGVLRRHQLDTTPHQHH 259
G+P Q + ++Q H QG P V+ RH + H H
Sbjct: 1647 GIPPQQQHQQQQHHGNGMNGNMQQGAPQVINRHPVSQQMHHQH 1689
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +2
Query: 149 GVPRQLEARRQDHQAR------HQGRPGVLRRHQLDTTPHQHH 259
G+P Q + ++Q H QG P V+ RH + H H
Sbjct: 1647 GIPPQQQHQQQQHHGNGMNGNMQQGAPQVINRHPVSQQMHHQH 1689
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +2
Query: 149 GVPRQLEARRQDHQAR------HQGRPGVLRRHQLDTTPHQHH 259
G+P Q + ++Q H QG P V+ RH + H H
Sbjct: 277 GIPPQQQHQQQQHHGNGMNGNMQQGAPQVINRHPVSQQMHHQH 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,828,267
Number of Sequences: 27780
Number of extensions: 193620
Number of successful extensions: 512
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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