Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30727
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.6  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 2   FFFFFLKFQIWVYLSNLIHVLEL*FLYN 85
           FFF F K +   +L + I ++ L FL+N
Sbjct: 223 FFFRFEKSKFEPFLISNISLVSLIFLFN 250


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 413 RNRIGGASVGGTIRNNPKRGGGG 345
           RN     + G T RN+   G GG
Sbjct: 397 RNNTSSRAQGETSRNSKNSGNGG 419


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 173 KTECLCTFSLVIHLISF 223
           KT+  CT  ++ HLI F
Sbjct: 37  KTDKNCTIVIIFHLILF 53


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 383 PPHSHHQ 403
           PPH HHQ
Sbjct: 738 PPHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 383 PPHSHHQ 403
           PPH HHQ
Sbjct: 630 PPHPHHQ 636


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 603 NSENSSFISESDTPKSK 653
           +SENS   S S TPK K
Sbjct: 50  DSENSEVSSNSYTPKIK 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,364
Number of Sequences: 336
Number of extensions: 2538
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)