Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30727
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.0  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   3.0  
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    24   5.2  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   6.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.1  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   9.1  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 297 TWWCRQRQTTSTYCKQLDAELDAYVKEIK*ITNENVHRHSVLS 169
           ++W +++  T    KQL A+LD        +T  N+H H++ S
Sbjct: 398 SYWKQKKLPTKKQHKQLQAQLDK-------LTQINIHLHALFS 433


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 609 RNLASSKVHLYIMIGQVDL*VLQMLCLKEKQML 511
           R +A +++H Y+ +  +DL    +L  KE Q+L
Sbjct: 517 RQIAENELHQYLSVENIDLENDPLLWWKEHQVL 549


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 89  TNYKEIIILVHVLNWINKPRFEILKKKKK 3
           T YK+II ++H++    +P  E ++K KK
Sbjct: 102 TLYKQIIDIIHLVVKKEQPTDEQMEKLKK 130


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 649 DFGVSDSDIKELFSEFGIL 593
           DFG   +D +++ SEFG +
Sbjct: 79  DFGYDIADFRDIHSEFGTI 97


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 288 CRQR-QTTSTYCKQLDAELDAYVKEIK*ITNENV 190
           C+Q   ++ST    +   +D Y ++I  ITN  V
Sbjct: 862 CKQAFDSSSTKADAMQKNVDRYTEQINEITNSKV 895


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
          protein.
          Length = 298

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 5/20 (25%), Positives = 16/20 (80%)
 Frame = -2

Query: 62 VHVLNWINKPRFEILKKKKK 3
          +H+L W+N+ R++ ++ +++
Sbjct: 3  IHLLRWLNEGRWQEIRAERR 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,540
Number of Sequences: 2352
Number of extensions: 11013
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)