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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30727
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    44   8e-05
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    44   8e-05
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    42   3e-04
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    42   3e-04
U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    42   3e-04
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    42   3e-04
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    42   3e-04
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    42   3e-04
Z68507-6|CAA92829.1|  240|Caenorhabditis elegans Hypothetical pr...    40   0.001
AF038605-5|AAB92019.1|  211|Caenorhabditis elegans Hypothetical ...    40   0.001
Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical p...    39   0.004
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    39   0.004
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    39   0.004
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    39   0.004
EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA...    39   0.004
EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA...    39   0.004
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    39   0.004
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    38   0.007
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    38   0.007
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    36   0.021
AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor pr...    34   0.084
U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor...    33   0.26 
AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing...    33   0.26 
AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing...    33   0.26 
AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing...    33   0.26 
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    32   0.45 
EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA...    32   0.45 
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    32   0.45 
U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical pr...    31   0.59 
AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical ...    31   0.78 
AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein...    31   1.0  
AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein...    31   1.0  
AC024810-13|AAK68518.1|  405|Caenorhabditis elegans Feminization...    31   1.0  
AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization...    31   1.0  
Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical p...    29   3.2  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    29   3.2  
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical p...    29   4.2  
AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical...    29   4.2  
AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = -3

Query: 679 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVR 506
           GP +L VSN+ F   D D+K +F +FG++    + ++  G S G   V  ER  DA R
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAER 207


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = -3

Query: 679 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVR 506
           GP +L VSN+ F   D D+K +F +FG++    + ++  G S G   V  ER  DA R
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAER 207


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V N++  ++D  +++ FS FG + SA V  D +GRS G   V FE+  +A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 673 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVF 530
           T + V N    +    +  +FS+FG + SA V  D  G+  G   V F
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAF 285


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V N++  ++D  +++ FS FG + SA V  D +GRS G   V FE+  +A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 673 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVF 530
           T + V N    +    +  +FS+FG + SA V  D  G+  G   V F
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAF 285


>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V NLD  V D  +K+ F  +G + SA V  D +GRS G   V FE+  +A
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 370


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V NLD  V D  +K+ F  +G + SA V  D +GRS G   V FE+  +A
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 310


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V NLD  V D  +K+ F  +G + SA V  D +GRS G   V FE+  +A
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 307


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L V NLD  V D  +K+ F  +G + SA V  D +GRS G   V FE+  +A
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 370


>Z68507-6|CAA92829.1|  240|Caenorhabditis elegans Hypothetical
           protein M18.7a protein.
          Length = 240

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = -3

Query: 661 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVRL 503
           +SNL   V  SD++ELF ++  L S SV+++  G SLGT D+    K DA RL
Sbjct: 78  ISNLAPTVISSDLEELFGDYR-LSSVSVNFNEHGDSLGTGDISL-TKRDAERL 128


>AF038605-5|AAB92019.1|  211|Caenorhabditis elegans Hypothetical
           protein C02B10.4 protein.
          Length = 211

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/52 (36%), Positives = 32/52 (61%)
 Frame = -3

Query: 688 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVV 533
           I TGP+ L++ NL   V+  D++ELF ++   +   +HY  +G S G AD++
Sbjct: 88  IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGESNGCADLI 138


>Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical
           protein F23B2.6 protein.
          Length = 227

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVRL 503
           ++ +SNL   V  SD++ELF  F + K  SV+++ +G + GT D+   +K DA RL
Sbjct: 81  RINISNLAETVISSDLQELFGAFNLHK-VSVNFNENGGAAGTGDITL-KKYDADRL 134


>Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical
           protein C01F6.5 protein.
          Length = 223

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVF-ERKAD 515
           ++ +SNL   V   D+++LF+EF I ++ SV+++  G+ +GT DV   +R AD
Sbjct: 73  RINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGKPVGTGDVTLPKRHAD 124


>Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical
           protein B0035.12 protein.
          Length = 836

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = -3

Query: 685 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           T   +K+ V N+ F  +D ++K LFS+FG + S      + G+  G A V F+ +A A
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASA 736


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA
           binding protein variantD protein.
          Length = 327

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA
           binding protein variantC protein.
          Length = 378

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 509
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G A V F  ++ AV
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 679 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           GPT +LV NL   + +  I+++F  FG ++   +  D +  + G A + F    DA
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDA 180


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 679 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           GPT +LV NL   + +  I+++F  FG ++   +  D +  + G A + F    DA
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDA 325


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -3

Query: 676 PTKLL-VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADA 512
           P+K L V NL    ++ D++++F EFG +    + YDR SG S G   + F    DA
Sbjct: 74  PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDA 130


>AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor
           protein 12 protein.
          Length = 248

 Score = 34.3 bits (75), Expect = 0.084
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 673 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVR 506
           TK+ V  L +  SD  + E F +FG ++ A V  DR + +S G   V  + +A A R
Sbjct: 35  TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91


>U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor
           U2AF65 protein.
          Length = 496

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 688 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTA 542
           +     K+ +  L   +++  +KEL   FG LK+ S++ D  G S G A
Sbjct: 286 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYA 334


>AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform a protein.
          Length = 496

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 688 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTA 542
           +     K+ +  L   +++  +KEL   FG LK+ S++ D  G S G A
Sbjct: 286 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYA 334


>AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform d protein.
          Length = 471

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 688 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTA 542
           +     K+ +  L   +++  +KEL   FG LK+ S++ D  G S G A
Sbjct: 261 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYA 309


>AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform c protein.
          Length = 474

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 688 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTA 542
           +     K+ +  L   +++  +KEL   FG LK+ S++ D  G S G A
Sbjct: 264 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYA 312


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 685 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVR 506
           T GP +L VSN+ F   + D+  +F + G +    + ++  G S G   V  +   DA R
Sbjct: 96  TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADR 154


>EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA
           binding protein variantB protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 548
           KL +  L    ++ +++E+F++FG ++  SV  D+ G+S G
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 685 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVR 506
           T GP +L VSN+ F   + D+  +F + G +    + ++  G S G   V  +   DA R
Sbjct: 96  TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADR 154


>U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical
           protein C14F11.2 protein.
          Length = 638

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 525 LSNTTSAVPKDLPDRS*CTDALLRM-PNSENSSFISESDTPKSKLDTSSLVGP 680
           + N  S+VP  LP  +   + L +  P+ +N++  + +D  KSKL +SSL  P
Sbjct: 359 VQNKISSVPSHLPTSNGGKENLRQSTPDEQNNNNNNNNDNEKSKLSSSSLSSP 411


>AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical
           protein C50D2.5 protein.
          Length = 138

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADA 512
           L + NL + ++  ++ E+F +FG ++   +    +  + GTA VV+E   DA
Sbjct: 21  LYIKNLPYKITTEEMYEIFGKFGAVR--QIRVGNTAETRGTAFVVYEDIFDA 70


>AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 640 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFER 524
           V+  +I ++FSEFG++   ++  D+  G   G A V FER
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFER 369


>AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 640 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFER 524
           V+  +I ++FSEFG++   ++  D+  G   G A V FER
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFER 369


>AC024810-13|AAK68518.1|  405|Caenorhabditis elegans Feminization of
           germline protein1, isoform a protein.
          Length = 405

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 640 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFER 524
           V+  +I ++FSEFG++   ++  D+  G   G A V FER
Sbjct: 116 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFER 155


>AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization of
           germline protein1, isoform b protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 640 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFER 524
           V+  +I ++FSEFG++   ++  D+  G   G A V FER
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFER 369


>Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical
           protein C25A1.4 protein.
          Length = 454

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVRL*NSI 491
           ++ ++NL F V    + E+F   G +       D+ G+S G   + +    +AV+  + +
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSML 248

Query: 490 TECHLMD 470
               L D
Sbjct: 249 NGQRLFD 255


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 509 EAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRNNPKRGG 351
           +AM+++NG  L+G  +   LA   +    +P  R R G    GG   N+ +RGG
Sbjct: 425 KAMEEWNGKELEGTVVEASLAKPPQEKKKKPVMRGR-GFGGAGGGAGNHGQRGG 477


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFE 527
           L V  L+   +D D++ +FS FG + +  +  D RSG SL  A + F+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFE 527
           L V  L+   +D D++ +FS FG + +  +  D RSG SL  A + F+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFE 527
           L V  L+   +D D++ +FS FG + +  +  D RSG SL  A + F+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 221


>U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical
           protein F25B5.7d protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -3

Query: 661 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 521
           V  L   VS+  +   FS FG ++ A    D  GR  G   V FERK
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERK 239



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 682 TGPTKLLVSNLDFGVSDSDIKELFSEFG 599
           TG  +L V NL   V ++++KELFS  G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHG 140


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -3

Query: 661 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 521
           V  L   VS+  +   FS FG ++ A    D  GR  G   V FERK
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERK 239



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 682 TGPTKLLVSNLDFGVSDSDIKELFSEFG 599
           TG  +L V NL   V ++++KELFS  G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHG 140


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
 Frame = -3

Query: 670 KLLVSNLDFGVSDSDIKELFSEFGIL---------KSASVH--YDRSGRSLGTADVVFER 524
           K++VSN+   V+ S ++  FS++G +         K  SV     +  R+ GTA + F++
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFKK 172

Query: 523 KADAVRL*NSITE 485
              A R  N+  E
Sbjct: 173 SEHADRAKNANPE 185


>U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical
           protein F25B5.7b protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 682 TGPTKLLVSNLDFGVSDSDIKELFSEFG 599
           TG  +L V NL   V ++++KELFS  G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHG 140


>AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical
           protein Y106G6H.12 protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 489 VILFHSLTASAFLSNTTSAVPKDLPDRS*CTDALLRMPNSENSSFISESDTPKSKLDTSS 668
           V L H+LT S + S+T    P +  DRS  +  +    N +N S   E  +PKS + +SS
Sbjct: 137 VNLQHTLTPSPYASSTPKHTPTNQMDRSKISFVIKPQINLKNCS--RELLSPKSSIFSSS 194


>AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical
           protein C07H6.4 protein.
          Length = 933

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 673 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRS 563
           T + VSN+   V++ D+   F  FG L +  + Y RS
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRS 236


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 667 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGTADVVF 530
           + V N+ + VS+  I+ +FS+ G +L    VH   +G+  G   + F
Sbjct: 20  VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66


>Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical
           protein R09B3.3 protein.
          Length = 85

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 506 AMKQYNGVPLDGRAMNIQLATSEIN 432
           A+ Q+NGV  +GRA+ + LA +  N
Sbjct: 61  AVDQFNGVDFNGRALRVNLAQNRNN 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,194,632
Number of Sequences: 27780
Number of extensions: 235323
Number of successful extensions: 621
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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