Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30725
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.81 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.81 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.81 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 284 CRIVC*KGGYSWPLRYRPGRISKIQA 361
           CR+VC K G  WP   +P  ++KI +
Sbjct: 61  CRLVCGKYGALWP---QPTSVTKISS 83


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 415 WNLVPVVVKLLYLASC 462
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 415 WNLVPVVVKLLYLASC 462
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 413 DETENTIASTTYSETSDKLVS*RFGLG 333
           DET+N  +  TY+E  +KL      LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 413 DETENTIASTTYSETSDKLVS*RFGLG 333
           DET+N  +  TY+E  +KL      LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +2

Query: 611 DQQGKNGPKKPQP--DHILVTEP 673
           D Q +N PK+P+P  D   VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 634 EEATTRPHPGNRAQGRARAPRATS 705
           EEA   P P  RA G A A R  +
Sbjct: 271 EEAERAPAPAVRAAGDAAAARGAA 294


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 40   VNNISKKRKFVGDGVFKAELNEF 108
            VNN S +R+F+   V   E N F
Sbjct: 1915 VNNPSARRRFIAHVVDFIETNNF 1937


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 40  VNNISKKRKFVGDGVFKAELNEFL 111
           +N++ K+R+ V + +FK E++E L
Sbjct: 75  LNDLEKRRE-VYESIFKVEVHEAL 97


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 40  VNNISKKRKFVGDGVFKAELNEFL 111
           +N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 40  VNNISKKRKFVGDGVFKAELNEFL 111
           +N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -1

Query: 447 QQLHNH--GHQIP**NGEHHSKHDVQRDL 367
           Q ++NH  GH +   + +HH  H  Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -1

Query: 447 QQLHNH--GHQIP**NGEHHSKHDVQRDL 367
           Q ++NH  GH +   + +HH  H  Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,577
Number of Sequences: 336
Number of extensions: 4157
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)