SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30725
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal prot...   153   3e-37
BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p pro...   153   3e-37
AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p pro...   153   3e-37
AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA...   153   3e-37
X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal prot...   149   3e-36
AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-P...    33   0.51 
M65178-1|AAA28738.1|  606|Drosophila melanogaster oskar protein.       29   4.8  
M63492-1|AAA28739.1|  606|Drosophila melanogaster maternal effec...    29   4.8  
AY058560-1|AAL13789.1|  468|Drosophila melanogaster LD24944p pro...    29   4.8  
AE014297-839|AAS65129.1|  468|Drosophila melanogaster CG10901-PC...    29   4.8  
AE014297-838|AAF54306.1|  606|Drosophila melanogaster CG10901-PA...    29   4.8  
AE014134-3271|AAN11085.1|  556|Drosophila melanogaster CG1864-PC...    29   4.8  
AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB...    29   4.8  
AE014296-1922|AAF50084.1|  557|Drosophila melanogaster CG7616-PA...    29   6.3  

>L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal protein
           S3/AP endonucleaseDNA repair protein protein.
          Length = 246

 Score =  153 bits (370), Expect = 3e-37
 Identities = 74/85 (87%), Positives = 77/85 (90%)
 Frame = +3

Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
           QKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76  QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135

Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
           CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160



 Score =  124 bits (300), Expect = 9e-29
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = +1

Query: 49  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 229 IIRELTSVVRSDSTFQS 279
            IRELT++V+    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +2

Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
           HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220


>BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p
           protein.
          Length = 253

 Score =  153 bits (370), Expect = 3e-37
 Identities = 74/85 (87%), Positives = 77/85 (90%)
 Frame = +3

Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
           QKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 83  QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 142

Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
           CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 143 CEVVVSGKLRGQRAKSMKFVDGLMI 167



 Score =  124 bits (300), Expect = 9e-29
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = +1

Query: 49  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 14  ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73

Query: 229 IIRELTSVVRSDSTFQS 279
            IRELT++V+    F++
Sbjct: 74  RIRELTAMVQKRFNFET 90



 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +2

Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
           HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 168 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 227


>AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p
           protein.
          Length = 246

 Score =  153 bits (370), Expect = 3e-37
 Identities = 74/85 (87%), Positives = 77/85 (90%)
 Frame = +3

Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
           QKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76  QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135

Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
           CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160



 Score =  124 bits (300), Expect = 9e-29
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = +1

Query: 49  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 229 IIRELTSVVRSDSTFQS 279
            IRELT++V+    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +2

Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
           HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220


>AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA
           protein.
          Length = 246

 Score =  153 bits (370), Expect = 3e-37
 Identities = 74/85 (87%), Positives = 77/85 (90%)
 Frame = +3

Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
           QKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76  QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135

Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
           CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160



 Score =  124 bits (300), Expect = 9e-29
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = +1

Query: 49  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 229 IIRELTSVVRSDSTFQS 279
            IRELT++V+    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +2

Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
           HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220


>X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal protein
           S3 protein.
          Length = 246

 Score =  149 bits (362), Expect = 3e-36
 Identities = 73/85 (85%), Positives = 76/85 (89%)
 Frame = +3

Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
           QKRFN     +ELYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+G
Sbjct: 76  QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKG 135

Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
           CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160



 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/77 (75%), Positives = 67/77 (87%)
 Frame = +1

Query: 49  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP  +EIIIMAT+TQ +L EKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66

Query: 229 IIRELTSVVRSDSTFQS 279
            IRELT++V+    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +2

Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
           HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220


>AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-PA
           protein.
          Length = 494

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 44  TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 169
           T  QRS +L+ +G+ +       L   P    P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405


>M65178-1|AAA28738.1|  606|Drosophila melanogaster oskar protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
           + Q   N PK P P +I   +  +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353


>M63492-1|AAA28739.1|  606|Drosophila melanogaster maternal effect
           protein protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
           + Q   N PK P P +I   +  +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353


>AY058560-1|AAL13789.1|  468|Drosophila melanogaster LD24944p
           protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
           + Q   N PK P P +I   +  +EP+ L PP
Sbjct: 184 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 215


>AE014297-839|AAS65129.1|  468|Drosophila melanogaster CG10901-PC,
           isoform C protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
           + Q   N PK P P +I   +  +EP+ L PP
Sbjct: 184 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 215


>AE014297-838|AAF54306.1|  606|Drosophila melanogaster CG10901-PA,
           isoform A protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
           + Q   N PK P P +I   +  +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353


>AE014134-3271|AAN11085.1|  556|Drosophila melanogaster CG1864-PC,
           isoform C protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +3

Query: 177 DHYYGHQDTEYARRERTHNP*AHFRSQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 356
           D++YG Q  +  +  + HN  +H  + +R+++P  +    +E  A       A A ++  
Sbjct: 92  DNFYGQQQQQQQQSYQQHNYNSH--NGERYSLP--TFPTISELAAATAAVEAAAAATVSS 147

Query: 357 KLIGG-LAVRRACYGVLRFIMESGA 428
             +GG   VRRA   V R +  +G+
Sbjct: 148 PSVGGPPPVRRASLPVQRTVSPAGS 172


>AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB,
           isoform B protein.
          Length = 1078

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +3

Query: 177 DHYYGHQDTEYARRERTHNP*AHFRSQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 356
           D++YG Q  +  +  + HN  +H  + +R+++P  +    +E  A       A A ++  
Sbjct: 614 DNFYGQQQQQQQQSYQQHNYNSH--NGERYSLP--TFPTISELAAATAAVEAAAAATVSS 669

Query: 357 KLIGG-LAVRRACYGVLRFIMESGA 428
             +GG   VRRA   V R +  +G+
Sbjct: 670 PSVGGPPPVRRASLPVQRTVSPAGS 694


>AE014296-1922|AAF50084.1|  557|Drosophila melanogaster CG7616-PA
           protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 177 LRADGSDPHFHAGVAVLGQLPSEELIEFCLEN 82
           LR D +DP +   V +L +  +E L+E CL N
Sbjct: 84  LRLDENDPEYETKVKLLHKKSAERLLETCLLN 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,895,327
Number of Sequences: 53049
Number of extensions: 778578
Number of successful extensions: 3273
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3268
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -