Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30725
(717 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 153 3e-37
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 153 3e-37
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 153 3e-37
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 153 3e-37
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 149 3e-36
AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-P... 33 0.51
M65178-1|AAA28738.1| 606|Drosophila melanogaster oskar protein. 29 4.8
M63492-1|AAA28739.1| 606|Drosophila melanogaster maternal effec... 29 4.8
AY058560-1|AAL13789.1| 468|Drosophila melanogaster LD24944p pro... 29 4.8
AE014297-839|AAS65129.1| 468|Drosophila melanogaster CG10901-PC... 29 4.8
AE014297-838|AAF54306.1| 606|Drosophila melanogaster CG10901-PA... 29 4.8
AE014134-3271|AAN11085.1| 556|Drosophila melanogaster CG1864-PC... 29 4.8
AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB... 29 4.8
AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA... 29 6.3
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 153 bits (370), Expect = 3e-37
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3
Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
QKRFN +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76 QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135
Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160
Score = 124 bits (300), Expect = 9e-29
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 229 IIRELTSVVRSDSTFQS 279
IRELT++V+ F++
Sbjct: 67 RIRELTAMVQKRFNFET 83
Score = 105 bits (252), Expect = 6e-23
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 153 bits (370), Expect = 3e-37
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3
Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
QKRFN +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 83 QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 142
Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 143 CEVVVSGKLRGQRAKSMKFVDGLMI 167
Score = 124 bits (300), Expect = 9e-29
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 14 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73
Query: 229 IIRELTSVVRSDSTFQS 279
IRELT++V+ F++
Sbjct: 74 RIRELTAMVQKRFNFET 90
Score = 105 bits (252), Expect = 6e-23
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 168 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 227
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 153 bits (370), Expect = 3e-37
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3
Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
QKRFN +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76 QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135
Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160
Score = 124 bits (300), Expect = 9e-29
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 229 IIRELTSVVRSDSTFQS 279
IRELT++V+ F++
Sbjct: 67 RIRELTAMVQKRFNFET 83
Score = 105 bits (252), Expect = 6e-23
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 153 bits (370), Expect = 3e-37
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3
Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
QKRFN +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+G
Sbjct: 76 QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKG 135
Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160
Score = 124 bits (300), Expect = 9e-29
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ +LGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 229 IIRELTSVVRSDSTFQS 279
IRELT++V+ F++
Sbjct: 67 RIRELTAMVQKRFNFET 83
Score = 105 bits (252), Expect = 6e-23
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 149 bits (362), Expect = 3e-36
Identities = 73/85 (85%), Positives = 76/85 (89%)
Frame = +3
Query: 255 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 434
QKRFN +ELYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+G
Sbjct: 76 QKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKG 135
Query: 435 CEVVVSGKLRGQRAKSMKFVHGLMI 509
CEVVVSGKLRGQRAKSMKFV GLMI
Sbjct: 136 CEVVVSGKLRGQRAKSMKFVDGLMI 160
Score = 120 bits (289), Expect = 2e-27
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSMLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP +EIIIMAT+TQ +L EKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66
Query: 229 IIRELTSVVRSDSTFQS 279
IRELT++V+ F++
Sbjct: 67 RIRELTAMVQKRFNFET 83
Score = 105 bits (252), Expect = 6e-23
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 509 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 688
HSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E +
Sbjct: 161 HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220
>AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-PA
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 44 TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 169
T QRS +L+ +G+ + L P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
>M65178-1|AAA28738.1| 606|Drosophila melanogaster oskar protein.
Length = 606
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
+ Q N PK P P +I + +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353
>M63492-1|AAA28739.1| 606|Drosophila melanogaster maternal effect
protein protein.
Length = 606
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
+ Q N PK P P +I + +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353
>AY058560-1|AAL13789.1| 468|Drosophila melanogaster LD24944p
protein.
Length = 468
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
+ Q N PK P P +I + +EP+ L PP
Sbjct: 184 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 215
>AE014297-839|AAS65129.1| 468|Drosophila melanogaster CG10901-PC,
isoform C protein.
Length = 468
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
+ Q N PK P P +I + +EP+ L PP
Sbjct: 184 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 215
>AE014297-838|AAF54306.1| 606|Drosophila melanogaster CG10901-PA,
isoform A protein.
Length = 606
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 608 WDQQGKNGPKKPQPDHILVTEPKDEPVPLEPP 703
+ Q N PK P P +I + +EP+ L PP
Sbjct: 322 YQQASVNAPKMPVPINIYSPDAPEEPINLAPP 353
>AE014134-3271|AAN11085.1| 556|Drosophila melanogaster CG1864-PC,
isoform C protein.
Length = 556
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 177 DHYYGHQDTEYARRERTHNP*AHFRSQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 356
D++YG Q + + + HN +H + +R+++P + +E A A A ++
Sbjct: 92 DNFYGQQQQQQQQSYQQHNYNSH--NGERYSLP--TFPTISELAAATAAVEAAAAATVSS 147
Query: 357 KLIGG-LAVRRACYGVLRFIMESGA 428
+GG VRRA V R + +G+
Sbjct: 148 PSVGGPPPVRRASLPVQRTVSPAGS 172
>AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB,
isoform B protein.
Length = 1078
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 177 DHYYGHQDTEYARRERTHNP*AHFRSQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 356
D++YG Q + + + HN +H + +R+++P + +E A A A ++
Sbjct: 614 DNFYGQQQQQQQQSYQQHNYNSH--NGERYSLP--TFPTISELAAATAAVEAAAAATVSS 669
Query: 357 KLIGG-LAVRRACYGVLRFIMESGA 428
+GG VRRA V R + +G+
Sbjct: 670 PSVGGPPPVRRASLPVQRTVSPAGS 694
>AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA
protein.
Length = 557
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 177 LRADGSDPHFHAGVAVLGQLPSEELIEFCLEN 82
LR D +DP + V +L + +E L+E CL N
Sbjct: 84 LRLDENDPEYETKVKLLHKKSAERLLETCLLN 115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,895,327
Number of Sequences: 53049
Number of extensions: 778578
Number of successful extensions: 3273
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3268
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -