Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30723
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro...    77   2e-14
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ...    77   2e-14
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    30   3.6  

>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
           protein.
          Length = 1205

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = +1

Query: 64  FVRRNDYAGIKFVSRLNALHSSALKKAEIMAYFKDFDAAEKIYLNEDRRDLAIALRKRLG 243
           FVR   Y GIK V RL  +HS  L++AEI A++ +F+ AEK+YL+ DRRDLAI LR  L 
Sbjct: 732 FVRCAHYPGIKLVKRLRTIHSKELQRAEISAFYGEFEEAEKLYLDADRRDLAIELRMTLC 791

Query: 244 HWFR 255
            WFR
Sbjct: 792 DWFR 795



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 559  KESGRTIQAANMAFQLANVEASKNASPLRIKKLYILAGHLYNQNPGAAGCT 711
            + +GR + AA +  Q+A  E  K A  LRIKKLY+LA  L  ++  A   T
Sbjct: 951  RNAGRHLDAARLLSQMAEREQEKRAPLLRIKKLYVLAALLAEEHLKAVATT 1001



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 314 RQYWDFYIDRQNWSGALEYYKMSNNTEGLKKCYMALEDNESLSK 445
           R+    + + ++W  A EYY+ S+  EG  +    LE  + L K
Sbjct: 817 REIGHHFANLRSWESAREYYEKSHYLEGYMEALYHLEQFDDLEK 860


>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
           protein.
          Length = 1205

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = +1

Query: 64  FVRRNDYAGIKFVSRLNALHSSALKKAEIMAYFKDFDAAEKIYLNEDRRDLAIALRKRLG 243
           FVR   Y GIK V RL  +HS  L++AEI A++ +F+ AEK+YL+ DRRDLAI LR  L 
Sbjct: 732 FVRCAHYPGIKLVKRLRTIHSKELQRAEISAFYGEFEEAEKLYLDADRRDLAIELRMTLC 791

Query: 244 HWFR 255
            WFR
Sbjct: 792 DWFR 795



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 559  KESGRTIQAANMAFQLANVEASKNASPLRIKKLYILAGHLYNQNPGAAGCT 711
            + +GR + AA +  Q+A  E  K A  LRIKKLY+LA  L  ++  A   T
Sbjct: 951  RNAGRHLDAARLLSQMAEREQEKRAPLLRIKKLYVLAALLAEEHLKAVATT 1001



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 314 RQYWDFYIDRQNWSGALEYYKMSNNTEGLKKCYMALEDNESLSK 445
           R+    + + ++W  A EYY+ S+  EG  +    LE  + L K
Sbjct: 817 REIGHHFANLRSWESAREYYEKSHYLEGYMEALYHLEQFDDLEK 860


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -1

Query: 404  SSILLCYWTFYSIPKHRSNFVYQCRSPNIDVGLFNVCIGGVRRHFQKF 261
            S +LL    F  + +H    ++ C +PN D+G  ++ + G+R  F +F
Sbjct: 893  SVVLLERGDFTPVKRHPDFRIFACMNPNTDIGKKDLPV-GIRNRFTEF 939


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,534,324
Number of Sequences: 53049
Number of extensions: 638273
Number of successful extensions: 1145
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)