Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30722
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 71 1e-13
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 47 3e-06
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 40 5e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 36 0.004
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.008
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.031
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 29 0.51
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 29 0.89
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 27 3.6
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.6
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 26 4.8
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos... 26 6.3
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 25 8.3
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 8.3
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 71.3 bits (167), Expect = 1e-13
Identities = 29/63 (46%), Positives = 46/63 (73%)
Frame = +2
Query: 296 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 475
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 476 KEL 484
K +
Sbjct: 132 KPI 134
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 132 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKP 251
++ED++ L +F V+ + LV FYAPWCGHCK L P
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAP 393
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 117 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
+ C +AE V + + +++ +V FYAPWCGHCK L PE
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPE 60
Score = 32.7 bits (71), Expect = 0.055
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 281 TDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM- 451
+DD V +AK+D TE S S+SG+PT+ F+ + + Y G R + ++
Sbjct: 403 SDDSNVVVAKIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFID 458
Query: 452 -RAQVGPSSKE 481
A P KE
Sbjct: 459 KHASFEPIKKE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 46.8 bits (106), Expect = 3e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 54 KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 233
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 234 CKRLKP 251
CK+L P
Sbjct: 63 CKKLVP 68
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = +2
Query: 311 VDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE--LSSEYNGPRESNGIVKYMRAQVGPS 472
VDC + ++ C Q+ V G+PT+K+ KG S++YNG R + K++ + PS
Sbjct: 86 VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSI-PS 144
Query: 473 SKELLT 490
++LT
Sbjct: 145 KVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKP--ETL 260
+V++L +F V+ LV FYA WCG+CKRL P ETL
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETL 183
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 198 ALVMFYAPWCGHCKRLKP 251
AL+ FYA WCGHCK L P
Sbjct: 42 ALIEFYATWCGHCKSLAP 59
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 165 DFSAVLSQHDTALVMFYAPWCGHCKRLKP 251
D++ +S +V FYA WCG CK LKP
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP 55
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.5 bits (78), Expect = 0.008
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 162 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
S+F +++ Q +V F+A WCG CK + P+
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPK 39
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.5 bits (73), Expect = 0.031
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 153 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 251
LTD+D + +S+ T + +Y P CG CKRL P
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGP 62
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 302 LAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 448
+A ++C K C+Q+S+ +PT +F K E EY G +V +
Sbjct: 333 VAHINCAVS-KRACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 29.5 bits (63), Expect = 0.51
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 647 FSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPT 534
F+R SL ++ K ++ +L + N+P +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 28.7 bits (61), Expect = 0.89
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 517 KDEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQ 696
K V+ G + + L+ A T + S +NE+ EKT K + L + K++
Sbjct: 1235 KVNAVLAGLQKNDPSAYSNMLE-ATHFELSTTSSTSDSNEI-EKTQEKKRLALEKQKKIM 1292
Query: 697 NKFEDSSVAF 726
+F D +F
Sbjct: 1293 QQFRDQQASF 1302
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 213 YAPWCGHCKRLKP 251
YA WCG CK + P
Sbjct: 27 YADWCGPCKAISP 39
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 145 FSILQIPTFRLFYLNMIQPWSCF 213
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 638 TSLAEE*AKVTSSLNLSAVLRNSPFRSD-SFSKNPTTTTSSLEVKLQNQ 495
++ +E +++TS NL + N PF SD +P T +E Q Q
Sbjct: 627 STASESKSEITSHQNLHTIPINKPFTSDRPLYSSPNDTLERVETGNQGQ 675
>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 589 DKLREEVTFAHSSANEVLEKT 651
DKL++ V A SS +EV++KT
Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 201 LVMFYAPWCGHCKRL 245
L+ FYAPW CK++
Sbjct: 24 LLNFYAPWAAPCKQM 38
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 465 PTWARMYLTMPLDSLGPLYSEESSPFLKIFS 373
P ++Y+T+ D +G E +SP +K+ S
Sbjct: 1414 PQKEKLYITISADEVGKFILEATSPTVKVSS 1444
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,033,549
Number of Sequences: 5004
Number of extensions: 62639
Number of successful extensions: 198
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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