Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30722
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 117 8e-27
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 63 2e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 60 2e-09
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 56 2e-08
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 55 7e-08
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 54 2e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 53 2e-07
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 51 1e-06
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 42 5e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 35 0.077
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 35 0.077
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 34 0.13
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.95
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 31 1.3
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 30 1.7
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 30 1.7
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 2.9
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 29 2.9
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 3.8
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 6.7
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 6.7
SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 117 bits (282), Expect = 8e-27
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +2
Query: 263 AAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIV 442
AA LK +DPPV LAKVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+GPR+S+GI+
Sbjct: 580 AAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGII 639
Query: 443 KYMRAQVGPSSKELLTVADFEALL 514
+YM+ Q GPSS E+ +V E L
Sbjct: 640 RYMKKQAGPSSVEIKSVDHLEKKL 663
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +1
Query: 529 VVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFE 708
VVVGF + + DLK F++TA+++R+ +FAH+S +VLEK YKN +V++RPK L K E
Sbjct: 670 VVVGFLDGDDDLKNAFMRTANEMRDSFSFAHASVTDVLEKYNYKNQIVVFRPKHLHTKLE 729
Query: 709 DSSVAF 726
S +A+
Sbjct: 730 PSFIAY 735
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +3
Query: 111 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PE
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPE 576
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 311 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 484
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 434 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 492
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 201 LVMFYAPWCGHCKRLKPE 254
L+ FYAPWCGHCK L+P+
Sbjct: 884 LIEFYAPWCGHCKSLEPK 901
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/74 (54%), Positives = 49/74 (66%)
Frame = +2
Query: 257 AVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNG 436
A AA +K +DPPV AK+D T ++F VSGYPTLKIFRKG EY GPRE +G
Sbjct: 101 AKAAKKMKLNDPPVPFAKMDATVAS-DIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESG 158
Query: 437 IVKYMRAQVGPSSK 478
IV+YM+ Q P+ K
Sbjct: 159 IVEYMKKQSDPNWK 172
Score = 75.4 bits (177), Expect = 4e-14
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +2
Query: 263 AAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIV 442
AA L+ DPP+ LA VD T + +++ V GYPTLK+FRKG+ ++EY G R+ GI
Sbjct: 218 AAQELQKHDPPIPLAIVDATIESE-LAQKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGIA 275
Query: 443 KYMRAQVGPSSK---ELLTVADF 502
YMR+QVGPSS+ L V DF
Sbjct: 276 SYMRSQVGPSSRILSSLKAVQDF 298
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 135 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
E+DV L +F V+ +++ LV FYAPWCGHCK L PE
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPE 99
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 147 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
L LT +F+ V+++ LV F+APWCGHCK+L PE
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPE 214
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 517 KDEVVVVGFFEKESD-LKGEFLKTADKLREEVTFAHSSANEVLEKTGY-KNNVVLYRPKR 690
KD+V ++GFF+ E D + +L+ + +R++ FAH+ + G K+++VL++P+R
Sbjct: 302 KDDVTIMGFFDGEDDKMLESYLEANNDVRDDYPFAHTFDAAAKKHFGIKKSSIVLFQPER 361
Query: 691 LQNKFE 708
+K+E
Sbjct: 362 FLSKYE 367
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 126 KAAEEDVLDLTDSDFSAVLSQ-HDTALVMFYAPWCG 230
K+ +E V + F +++ L+ FYAPWCG
Sbjct: 521 KSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG 556
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +2
Query: 257 AVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNG 436
A AAG LK++ + LAKVD T K E+F V GYPT+K F+ G+ SEY G R +
Sbjct: 64 AKAAGQLKSEKSEIKLAKVDATAETKLG-EKFQVQGYPTIKFFKDGK-PSEYAGGRTAPE 121
Query: 437 IVKYMRAQVGPSSKELLT 490
IV ++ + GP +K+L T
Sbjct: 122 IVSWLNKKTGPPAKDLAT 139
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Frame = +3
Query: 96 VLLLGIIYLCKAAE----EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L PE
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPE 62
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 153 LTDSDFSAVLSQHD-TALVMFYAPWCGHCKRLKP 251
L +F V D V FYAPWCGHCK+L P
Sbjct: 389 LCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAP 422
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 284 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRA 457
D + +AK+D T + E V +PT+K F K + +YNG R + VK++ +
Sbjct: 433 DHADIVVAKMDSTA---NEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLES 487
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +3
Query: 111 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PE
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPE 51
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +3
Query: 135 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPE 254
+EDV++LTD++F VL+ D LV F+APWCGHC+RL PE
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPE 118
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 338 TCEQFSVSGYPTLKIFRKGELSS----EYNGPRESNGIVKY 448
T ++ V GYPT+K+F G +S +Y G R ++ I++Y
Sbjct: 143 TASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQY 183
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 350 FSVSGYPTLKIFRKGELS-SEYNGPRESNGIV 442
+++ G+PT+KIF + S +YNG R + GIV
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +3
Query: 81 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 251
G++ F L L + + + V+DLT +F V++ ALV FYAPWCGHCK+L P
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAP 59
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 281 TDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRA 457
T V +AKVD +G + +F V G+PT+K F KG + EYNG R+ N +K++
Sbjct: 69 TQSSDVIIAKVDA-DGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEE 127
Query: 458 QVG 466
+ G
Sbjct: 128 KTG 130
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 53.6 bits (123), Expect = 2e-07
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 141 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPETL 260
+V L+D+ F + + + LVMFYAPWCGHCK+ KPE +
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELM 235
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 141 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
+V+ L D F ++++ + LVMFYAPWCGHCK +KPE
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPE 120
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 201 LVMFYAPWCGHCKRLKPE 254
+++ Y CG+CKR KPE
Sbjct: 3 VIVLYIAGCGYCKRFKPE 20
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 141 DVLDLTDSDFSAVLSQHDTALVMFYAP 221
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 305 AKVDCTEG-GKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 481
AKVDCT+ K C+ F + GYP++K+F+ G+ + +Y G R +V YM + +S++
Sbjct: 75 AKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 144 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
V DL +F ++ + D LV FYAPWC HC+ L P+
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQ 58
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 129 AAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
+AEED V L SDF L+ + LVMFYAPWCGHCK KP+
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPK 185
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 135 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 251
+ V+ LTD + H+ LVM++APWCGHC +KP
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKP 87
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 284 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 463
D P AK+DCT+ G C++ V+GYPTL+ + G+ EY+G R + ++ +M
Sbjct: 195 DQPNRVFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPP 253
Query: 464 GPSS 475
P S
Sbjct: 254 LPLS 257
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 239 ETKARDAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNG 418
E K AA +L +D LA VDCT+ K ++ +++GYPT+K++ K +++
Sbjct: 84 EMKPNYYKAAQVLHDEDANCNLAAVDCTKH-KDVAKKVALAGYPTVKLY-KASNTAKAAS 141
Query: 419 PRESNGIVKYM 451
E + +VK +
Sbjct: 142 AEEDSSLVKQL 152
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2
Query: 299 ALAKVDCTEGGKSTCEQFSVSGYPT 373
ALA VDCTE K+TC Q + GYPT
Sbjct: 19 ALAAVDCTES-KNTCNQRDIKGYPT 42
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 135 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
E +L+L DS+F + +H LV FYAPWC HCK++ P+
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPD 172
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 132 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 251
A VL+L D +F+ + +++ LV FYAPWC C+RL P
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSP 88
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 260 VAAGLLKTDDPPVALAKVDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 430
VA LL V LAKVDC+ K TC++++V PT+ +F G+ E+ G +
Sbjct: 176 VAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRN 235
Query: 431 NGIVK 445
+K
Sbjct: 236 KKSIK 240
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 311 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 484
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+P+
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPK 60
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 296 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 445
V LA+V+C + C+ +++ YPT+K+FRKG Y GP +++ +VK
Sbjct: 10 VRLARVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVK 58
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 168 FSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
F+ VL+ D +V FYAPWCG C R P+
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMRFAPK 472
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 IYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPE 254
++ ++ +V L DF S+V S V F+APWC C RL PE
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPE 323
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +2
Query: 293 PVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPS 472
PV VDCT + C Q+++ YPT ++ + ++ G + I++++ + +
Sbjct: 335 PVGFGTVDCTVHSQ-LCHQYNIRSYPTTILYNNSQ-PHQFIGHHNALDIIEFVEVEYPEA 392
Query: 473 SKELLTVADFEALLLRMK*WL 535
+ D + + W+
Sbjct: 393 FRSAAFTGDIRVPCAQQEDWV 413
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 144 VLDLTDSDFSAVLSQHDTALVM--FYAPWCGHCKRLKP 251
VL+L DS F+A L+ T LV+ F A WCG CK + P
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSIAP 47
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 156 TDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPETL 260
TDS V++ L++FY PWCG C P L
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLL 558
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 34.7 bits (76), Expect = 0.077
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +3
Query: 162 SDFSAVLSQHDTALVM--FYAPWCGHCKRLKPE 254
++F++V++ LV+ FYA WCG C+++KP+
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPK 51
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 296 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 430
+ +AKVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 19 LTIAKVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 356 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 451
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 204 VMFYAPWCGHCKRLKP 251
V FYAPWC HC +L P
Sbjct: 111 VKFYAPWCIHCIKLAP 126
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 356 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 451
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 156 TDSDFSAVLSQHDT--ALVMFYAPWCGHCKRL 245
T +DF +LS A+V F+APW HC ++
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = +3
Query: 168 FSAVLSQ--HDTAL--VMFYAPWCGHCKRLKPE 254
F+ VLS H++ L V FYAPWCG +R E
Sbjct: 441 FAKVLSSFLHNSPLNFVFFYAPWCGQSRRAVEE 473
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 165 DFSAVLSQHDTALVMFYAPWCGHCKRLKPE 254
+F L ++ A + F A WCG C+ + P+
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPK 32
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 MFGSLKFVLLLGIIYLCKAAE-EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 245
+F + F+L+ I+ + + +++ T+ + + + FYAPW HC+R+
Sbjct: 4 LFITNTFLLISLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 617 AKVTSSLNLSAVLR-NSPFRSDSFSKNPTTTTSSLEVK 507
AK TS++ L NSP + S S+ T+TT SLEVK
Sbjct: 1687 AKTTSTIRTELTLDVNSPKQEMSTSRPQTSTTLSLEVK 1724
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 159 DSDFSAVLSQHDTALVM--FYAPWCGHCKRLKP 251
DS FS + + + LV+ F A WCG CK + P
Sbjct: 16 DSFFSVEIERAGSRLVVIDFTATWCGPCKSIAP 48
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 94 NFSDPNISNLAGAFQQNRTNYSAFQPNLTN 5
N PNI++ A Q N T+ + QPN+T+
Sbjct: 1696 NVKQPNITDAGNATQANVTSLNVTQPNITD 1725
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 94 NFSDPNISNLAGAFQQNRTNYSAFQPNLTN 5
N + NI++ + A Q N TN++ QPN+T+
Sbjct: 1654 NVTHLNITDTSNATQANVTNHNVKQPNITD 1683
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 144 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 239
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -2
Query: 653 PVFSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPTTTTSSLE 513
P + + + E + VTSS+ S +++ +D+F + P +++S++E
Sbjct: 370 PSVTPSLTSSESSAVTSSMTSSVIMKQDSSLADAFDRAPMSSSSAVE 416
>SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 58 HRLNSKCSDH*SLFFYWA*FIYVKRPRRMFSILQIPTFR 174
HR +SKC+ H + FF W+ I+ P + I + F+
Sbjct: 179 HRTHSKCNQHANSFFPWSINIWNNLPGSITDIKEKGKFK 217
>SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 516 RSKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEESSPFLKIFSVGYPDT 355
R+ A S TVRS+ + TW + +PLD + Y + S+ L+I + DT
Sbjct: 108 RASAETSVTVRSNPKPKVTWFKNGYRVPLDDI--KYKQTSADTLEIAGLVPQDT 159
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,501,872
Number of Sequences: 59808
Number of extensions: 457610
Number of successful extensions: 1323
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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