Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30721
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 130 FFLLNLLYILNRPY 89
           FF++N+LYI N+ Y
Sbjct: 278 FFIVNVLYICNQCY 291


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 386 IIYFFDLIKIPTFLDYFVNGVSLVYCKAFNDS 291
           + Y+     I T LD++V  V  ++C A   S
Sbjct: 310 LAYYSTTCDIATILDFWVRCVLSLHCAAVGGS 341


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 28  FSGHIYPDNPE 60
           F+GH+ PDN E
Sbjct: 334 FNGHLNPDNDE 344


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 377 FFDLIKIPTFLDYFVNGVSLV 315
           +FD+I I TFL  F+    ++
Sbjct: 223 YFDVIVISTFLQLFLEHYEVI 243


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 377 FFDLIKIPTFLDYFVNGVSLV 315
           +FD+I I TFL  F+    ++
Sbjct: 149 YFDVIVISTFLQLFLEHYEVI 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,004
Number of Sequences: 336
Number of extensions: 2722
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)